Query= MSMg01no143_p08.b1 MSMg01no143_p08.b1 CHROMAT_FILE:
MSMg01no143_p08.b1 PHD_FILE: MSMg01no143_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:39 2005
(605 letters)
>mm_chr12_63165952_63166956
Length = 1005
Score = 1110 bits (574), Expect = 0.0
Identities = 594/601 (98%)
Strand = Plus / Plus
Query: 5 gaattccatacccacgaaggaaggctggaaaagagccttggggcatcagaactgctcatt 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatacccaagaaggaaggctggaaaagagccttggggcatcagaactgctcatt 264
Query: 65 gccaatagtgatgacctggatatcaggcagctcatagcttttttccaaggatgaagagga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gccaatagtgatgacctggatatcaggcagctcatagcttttttccaaggatgaagagga 324
Query: 125 agtgacagtgcctatctcctgctcaaagtctagggcatcatagcacagcttttctttgat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtgacagtgcctatctcctgctcaaagtctagggcatcatagcacagcttttctttgat 384
Query: 185 gtcacttacaattttcctttcagctgtggtggtgaagctgcagcaatgctcagataggat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtcacttacaattttcctttcagctgtggtggtgaagctgcagcaatgctcagataggat 444
Query: 245 cttcatgaggtagcctgtcaagtctcagccagcaaggtccagaagtaggatggcatgagg 304
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 445 cttcatgaggtagcctgtcaagtctcagccagcaaggtccagaagcaggatggcatgagg 504
Query: 305 gagagcatagccctagttgatgagcacagtgtgggtgacctggtctctgggagtccatca 364
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gagaacatagccctagttgatgagcacagtgtgggtgacctggtctctgggagtccatca 564
Query: 365 tattgccagtggtacaaccagagacatacaggctccctgagcgcaagtactctgtatgaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tattgccagtggtacaaccagagacatacaggctccctgagcgcaagtactctgtatgaa 624
Query: 425 tctgtggctccttcctgacctcactgtccaccttcgagcagatatggatcagcaagcagg 484
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tccgtggctccttcctgacctcactgtccaccttcgagcagatatggatcagcaagcagg 684
Query: 485 aatacgatgtgtctggcccctccattgtgtacctcanatgcttctaggcagactattact 544
||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 685 aatacaatgtgtctggcccctccattgtgtacctcaaatgcttctaggcagactattact 744
Query: 545 gagctgtgttttacaccctttctttgacaaaacctaacttgcctagaaaacaaaaaacaa 604
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cagctgtgttttacaccctttctttgacaaaacctaacttgcctagaaaacaaaaaacaa 804
Query: 605 a 605
|
Sbjct: 805 a 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_p08.g1 MSMg01no143_p08.g1 CHROMAT_FILE:
MSMg01no143_p08.g1 PHD_FILE: MSMg01no143_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:39 2005
(483 letters)
>mm_chr12_63318276_63319155
Length = 880
Score = 851 bits (440), Expect = 0.0
Identities = 469/480 (97%), Gaps = 3/480 (0%)
Strand = Plus / Minus
Query: 1 ctaattccagctgtatgagagccattttcctttgtagactgcacatgctttcttaacgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 ctaattccagctgtatgagagccattttcctttgtagactgcacatgctttcttaacgag 796
Query: 61 ggggactgtgattgaggtcactcacttgcctcaaaactattaagcaagaaagtgaaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ggggactgtgattgaggtcactcacttgcctcaaaactattaagcaagaaagtgaaagga 736
Query: 121 ctgagaaagaaaaacctattgacaacttggccaacaacaacagcaacaacaacagcaaaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 735 ctgagaaagaaaaacctattgacaacttggccaacaacaacagcaacaacaataacaaaa 676
Query: 181 aatactttaaaaataaaaccaatctctgttacaaaataatggagcttattattctcttaa 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aatacgttaaaaataaaaccaatctctgttacaaaataatggagcttattattctcttaa 616
Query: 241 cactataaggaacattttgatttataatttgttgtttttttttcatgtcttttgtttttc 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 615 cactataaggaacattttgatttataatttgtt---tttttttcatgtcttttgtttttc 559
Query: 301 tgccccttaatttttatcttgtttttaaggccacctgttctataataactcaataatcat 360
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 558 tgccccttaatttttatcttgtatttaaggccacctgttctataataactcaataaacat 499
Query: 361 aagccctacaagataaactattaaaaactaagggaaatttaggtgatttaacatatgctg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aagccctacaagataaactattaaaaactaagggaaatttaggtgatttaacatatgcta 439
Query: 421 ggtgagtttctaacatttgctgcatttcaaattgaatatttacaaaatttattttttgaa 480
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 438 ggtgagtttctaacatttgctgcaattcaaattgagtatttacaaaatttattttttgaa 379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 880
Length adjustment: 10
Effective length of query: 473
Effective length of database: 870
Effective search space: 411510
Effective search space used: 411510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
