CCTTTTNAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGAG
AATCCGCGGAATTCTCTCTTCTAGCCGCCATTATCTACCTGTCAGTCCTT
AGCAAGGAATGGAGCCTCAAGAGACTTTCCTCCCATCCAGGAGAGGATGT
TGGTGAGGTCAAACTTGTAAAGGTCTTGTTTTGGCAAATAAAACTGTCCA
GAGTTTAAGAATTCGGCACTAATGTCTTGCTTTGAAGACTGAATTCCCCC
TCACCTTATTCTTGACTCCTGACTCCAGCTCTTACATTCTTTCCACCTCT
CTTCCTCCATGTGCCCTGATGAGTGGAGTGACATAGAAACCTCACTAATA
GCTAAGTATTGAGTGTCCTTTATTCTTACCACCATGATCCATCAAGAGAT
TTGTAGCTTCAGTTGATCATTGTAAAAGGGAGCTTCTCTGACCAACGCTG
ATGGCAAGCGTTACTGAAAGCAAACAACAAAAACTTTAAATACAGAATGA
GGACTATTCAACACTACAAAGGGCATCCATGAGAGATCAAGCTAGTTTAA
TTCCTGGTAAATAAAATAAAAAAACATAATAAAAAATATGTTACTGTGCA
TGCATGACAATGTGATCATGGAATATGTACAATTGAAATGTGAACAGTTA
CAATGAAAACTACCATTTGTACGCTAATTTTAGGATAAAA

NNNTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATCATATAGCCTTCCTGAGCAAC
TATATATACTTATGGATGCTCCTAGATGCTCCTTCAACACCTGTAGAAAG
TTTATTTGTTTTTAAATAACACATTTTATTCCAATTACATCCCACATTGA
ATTAAAAAAAAAACACAGATGTGTGAAACTCATATATTAGTTTCAAGTGA
TATCTAATTAATTAAACTCTTTGCAAACAGATCCTAAATAGAACTTTACC
TAAATATTGGCAATACAAGTTGAATTTCCCTTGAATCTTCAGTTTAAAAC
TCATATGTTTCCAACTCACTGTGCCTTGGGAACAGAATTGGGGTAATTTT
GGAAATATGTATTTAAAGACTTTTTAAAATCACTTTCTTAAAATTGTGAC
AATAGAATTATTTTCCTCTGGAAATTGATGTCTGATCTGTCTTTCTATGA
GGTGATATGTCTCCCTGAGGCTAAACATTTGCTGGAATATGCCATCCCTT
TAAATTTTTGCCTTTAGCCTAGCCATGCAGAGGGAGTCAATAGCTTCATA
GAAAGGTTGAGTAGTGAAGCCATTTAAGCTCCATTTACCTTTCTTTATGA
CTGTCACTGTGAGATCGTTCTTAAACATCTGAAAAATAAAACTCCAATGT
ACCACATG

Query= MSMg01no144_l03.g1 MSMg01no144_l03.g1 CHROMAT_FILE:
MSMg01no144_l03.g1 PHD_FILE: MSMg01no144_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:35 2005
         (631 letters)



>mm_chr12_98954730_98955761
          Length = 1032

 Score = 1120 bits (579), Expect = 0.0
 Identities = 618/633 (97%), Gaps = 7/633 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   catatagccttcctgagcaactatatatacttatggatgctcctagatgctccttcaaca 62
           ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||
Sbjct: 832 catatagccttcctgagcaactatatatacgaatggatgctcctagatgctccttcaaca 773

                                                                       
Query: 63  cctgtagaaagtttatttgtttttaaataacacattttattccaattacatcccacattg 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 cctgtagaaagtttatttgtttttaaataacacattttattccaattacatcccacattg 713

                                                                       
Query: 123 aattaaaaaaaaaacacagatgtgtgaaactcatatattagtttcaagtgatatctaatt 182
           ||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 712 aatt--aaaaaaaacacagatgtgtgaaactcatatattagtttcaagtgacatctaatt 655

                                                                       
Query: 183 aattaaactctttgcaaacagatcctaaatagaactttacctaaatattggcaatacaag 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 aattaaactctttgcaaacagatcctaaatagaactttacctaaatattggcaatacaag 595

                                                                       
Query: 243 ttgaatttcccttgaatcttcagtttaaaactcatatgtttccaactcactgtgccttgg 302
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| 
Sbjct: 594 ttgaatttcccttgaatcttcagtttaaaactcaaatgtttccaactcactgtgccttga 535

                                                                       
Query: 303 gaacaga-attggggtaattttggaaata---tgtatttaaagactttttaaaatcactt 358
           ||||| | |||||||||||||||||||||   ||||||||||||||||||||||||||||
Sbjct: 534 gaaca-acattggggtaattttggaaatatgttgtatttaaagactttttaaaatcactt 476

                                                                       
Query: 359 tcttaaaattgtgacaatagaattattttcctctggaaattgatgtctgatctgtctttc 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tcttaaaattgtgacaatagaattattttcctctggaaattgatgtctgatctgtctttc 416

                                                                       
Query: 419 tatgaggtgatatgtctccctgaggctaaacatttgctggaatatgccatccctttaaat 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tatgaggtgatatgtctccctgaggctaaacatttgctggaatatgccatccctttaaat 356

                                                                       
Query: 479 ttttgcctttagcctagccatgcagagggagtcaatagcttcatagaaaggttgagtagt 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ttttgcctttagcctagccatgcagagggagtcaatagcttcatagaaaggttgagtagt 296

                                                                       
Query: 539 gaagccatttaagctccatttacctttctttatgactgtcactgtgagatcgttcttaaa 598
           ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gaagctatttaagccccatttacctttctttatgactgtcactgtgagatcgttcttaaa 236

                                            
Query: 599 catctgaaaaataaaactccaatgtaccacatg 631
           ||||||||||| |||||||||||||||||||||
Sbjct: 235 catctgaaaaagaaaactccaatgtaccacatg 203


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1032
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1022
Effective search space:   634662
Effective search space used:   634662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)