Query= MSMg01no144_o10.b1 MSMg01no144_o10.b1 CHROMAT_FILE:
MSMg01no144_o10.b1 PHD_FILE: MSMg01no144_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:50 2005
(563 letters)
>mm_chr12_48258578_48259540
Length = 963
Score = 1029 bits (532), Expect = 0.0
Identities = 550/556 (98%)
Strand = Plus / Plus
Query: 8 gaattcactctgttcctagagttgcaacacgagaggaaagagatagtcaccgtctgcact 67
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcactctgctcttagagttgcaacacgagaggaaagagatagtcaccgtctgcact 267
Query: 68 tccttcagtttctaggctgatttgtgacctgtttgaaacttgtcaccatgtttcatggtt 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tccttcagtttctaggctgatttgtgacctgtttgaaacttgtcaccatgtttcatggtt 327
Query: 128 tgttttaaactaaacagtagaaagtacatactgagggaaaactggcattatatactgcct 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tgttttaaactaaacagtagaaagtacatactgagggaaaactggcattatatactgcct 387
Query: 188 gtaattaaaaatggaaaggaaatcagaccaagtttttatttagaagttacattgaagcag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gtaattaaaaatggaaaggaaatcagaccaagtttttatttagaagttacattgaagcag 447
Query: 248 gagccagaattatgtctgaacctccaaaatactatttttgtgtgaagaagaatctttgta 307
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 448 gagccagaattatgtctgaacctccaaaatacgatttttgtgtgaagaagaatctttgta 507
Query: 308 tgataaacagtttctcccaaatttcttcttagaagaattaaagtaggaaaacaaatctta 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tgataaacagtttctcccaaatttcttcttagaagaattaaagtaggaaaacaaatctta 567
Query: 368 tgacccaaatgtggcagaagctattttggttcatggaaaatacatttgtcaccccctttt 427
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tgagctaaatgtggcagaagctattttggttcatggaaaatacatttgtcaccccctttt 627
Query: 428 tttgcagtcagtcccacccatttcaaggctgactcaataggtggagcaggtgttatggtc 487
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 628 tttgcagtcagtcccacccatttcaaggctgactcaataggtggagcaggtgttatagtc 687
Query: 488 ccagtgagctcatggggttggggagctccttgtcttgcctgtcaccctctagctctgact 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ccagtgagctcatggggttggggagctccttgtcttgcctgtcaccctctagctctgact 747
Query: 548 cttcagcccatggggg 563
||||||||||||||||
Sbjct: 748 cttcagcccatggggg 763
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no144_o10.g1 MSMg01no144_o10.g1 CHROMAT_FILE:
MSMg01no144_o10.g1 PHD_FILE: MSMg01no144_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:50 2005
(658 letters)
>mm_chr12_48419491_48420546
Length = 1056
Score = 1214 bits (628), Expect = 0.0
Identities = 650/658 (98%), Gaps = 2/658 (0%)
Strand = Plus / Minus
Query: 1 cctaatgattttgaatgagactataaagaagatcccatccttaaccttggggtgcaaaag 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 733 cctaatgattttgaatgagactataaagaagaccccatccttaaccttggggtgcaaaag 674
Query: 61 gatctggctactgctcacagaaccacatgaaagtgatagagagaggaagctgctccgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gatctggctactgctcacagaaccacatgaaagtgatagagagaggaagctgctccgatt 614
Query: 121 ataggatagaagcttgctcttgcttcagacccaagtaacacattctgaactatagcaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ataggatagaagcttgctcttgcttcagacccaagtaacacattctgaactatagcaatt 554
Query: 181 cactggatcctctctctgcatttggtattctgaaatactttcatttccctttacataggc 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 553 cactggatcctctctctgcatttggtattctgaaatactttcatttctctttacataggc 494
Query: 241 aattgactaaattgttcattttccccctattgcatatttaattccattctcttcaataga 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aattgaccaaattgttcattttccccctattgcatatttaattccattctcttcaataga 434
Query: 301 tatgcacaggactgcatatgttttatcagaaaagagtcaacaacaatggcaaataaattc 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 433 tatgcacaggactgcatatgttttatcagaaaagagtcaacaacagtggcaaataaattc 374
Query: 361 ttctaggcctcagtggcacaataagaataatgggcacactgtgtaaagtaaaacagagat 420
||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 373 ttccaggcctcagtggcacaataagaataatgggcacac--tgtaaagtaaaacagagat 316
Query: 421 tagatgttgttaaagaaaactgtcaagacctccacaaataagaagtggcaaaactcagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tagatgttgttaaagaaaactgtcaagacctccacaaataagaagtggcaaaactcagaa 256
Query: 481 attgaatttagatgttttcaccctaaatcttcattgtaaggatttatatcgatcctttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 attgaatttagatgttttcaccctaaatcttcattgtaaggatttatatcgatcctttat 196
Query: 541 tttttattactttaatattaaaataatcatggagttttgcattgaattattaaattttac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tttttattactttaatattaaaataatcatggagttttgcattgaattattaaattttac 136
Query: 601 attcaacaactgtttttcttgatttatgtgtttctgtttctatttacattttgctttt 658
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 135 attcaacaactgtttttcttgatttatgtgtttctgtttctatttatattttgctttt 78
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1056
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1046
Effective search space: 677808
Effective search space used: 677808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
