Query= MSMg01no145_g21.b1 MSMg01no145_g21.b1 CHROMAT_FILE:
MSMg01no145_g21.b1 PHD_FILE: MSMg01no145_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:30 2005
(555 letters)
>mm_chr12_5641679_5642633
Length = 955
Score = 975 bits (504), Expect = 0.0
Identities = 543/556 (97%), Gaps = 2/556 (0%)
Strand = Plus / Plus
Query: 1 cacactgcatgctatcactgggctaatgttctgaaaacaccactcttacagagtcactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacactgcatgctatcactgggctaatgttctgaaaacaccactcttacagagtcactca 260
Query: 61 aactcctcgatcctccatttcctcattgaaaaatggatatgtttgttttccctgcttgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactcctcgatcctccatttcctcattgaaaaatggatatgtttgttttccctgcttgcc 320
Query: 121 tatctgatattgttgtggaaaacaccagaaaagaccgtggtagaaagtgctttgcggaga 180
|| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 321 tacctgatattgttgtggaaagcaccagaaaagaccgtggtagaaagtgctttgtggaga 380
Query: 181 gaatcatgctgtgcatatggagctagaccttggagatgtgagcctcccatcacctactgc 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 gaatcatgctgtgcatatggagctagaccttggagatgtgggcctcccatcacctactgc 440
Query: 241 ctactacagcatgtgcacacaattgagcttggtgttcaaggcttccatgagcaagcataa 300
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctactacagcaagtgcacacagttgagcttggtgttcaaggcttccatgagcaagcataa 500
Query: 301 ccttggtcatctttcccttccccacctgtacttttgtgacatacaccagtaccttccccg 360
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 501 ccttggtcatctttcccttccccacctgtacttttgtgacatac-ccagtaccttccctg 559
Query: 361 agtgttgctcatctccgggaatctttacatctgaggtgttgtaggctctatagctagaag 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agtgttgctcatctccgggaatctttacatctgaggtgttgtaggctctatagctagaat 619
Query: 421 tgtttcagtgtggctgcacatttaaaaac-acagaacagtctgaaagaactccatccacc 479
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 620 tgtttcagtgtggctgcacatttaaaatccacagaacagtctgaaagaactccatccacc 679
Query: 480 tttgattgagtcattttggaatgaagtcaggaaggttgtgctcagttacatattccaatg 539
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 680 tttgattgaatcattttggaatgaagtcaggaaggctgtgctcagttacatattccaatg 739
Query: 540 actctaatggatgcct 555
||||||||||||||||
Sbjct: 740 actctaatggatgcct 755
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_g21.g1 MSMg01no145_g21.g1 CHROMAT_FILE:
MSMg01no145_g21.g1 PHD_FILE: MSMg01no145_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:30 2005
(591 letters)
>mm_chr12_5772541_5773531
Length = 991
Score = 876 bits (453), Expect = 0.0
Identities = 462/465 (99%)
Strand = Plus / Minus
Query: 1 ctaatcaccctgcctcaacttcctgagtgctgagagtataggtatgcctggttgtagact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ctaatcaccctgcctcaacttcctgagtgctgagagtataggtatgcctggttgtagact 406
Query: 61 ttttaatgtctgtcatattcagaatgtttaaaggttttaccaagtctttaaacatttata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ttttaatgtctgtcatattcagaatgtttaaaggttttaccaagtctttaaacatttata 346
Query: 121 tttaagggcatggttatagtaaaactgtgagattaatagagactaaagatgtgttagaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tttaagggcatggttatagtaaaactgtgagattaatagagactaaagatgtgttagaat 286
Query: 181 caattagtattcacaagatttagattctgttagtatagcttgcataaattagctcacaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 caattagtattcacaagatttagattctgttagtatagcttgcataaattagctcacaga 226
Query: 241 atctccacaatcttcctcttggacataataagattattggtcccattttatagatggtca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 atctccacaatcttcctcttggacataataagattattggtcccattttatagatggtca 166
Query: 301 aactaatgtatggggaagttaagttacttgtctttgggacacctagaaagtcagctacaa 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 165 aactaatgtatggggaagttaagttccttgtctttgggacacctagaaagtcagctacaa 106
Query: 361 agccaagattcaggcctaagcaatgagcacagtctttgatcttgaccaccacactgggct 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 105 agccaagattcaggcctaagcaatgagcacagtctttgaccttgaccaccacactgggct 46
Query: 421 ttcatcatgcaaagggttagctcaataacaggcacatggttccca 465
|||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 45 ttcatcatgcaaagggttagctcaatgacaggcacatggttccca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
