NNNTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCG
CGGAATTCCCCACCCTCTCCTCTCTCTTTCACACACACACACACACACAC
ACATACACACATATTAAAATTTCTTAGAGTTGGAAGAGAACTACTGATCT
AGATAAAATTTAAGGACTGAACAATATCAATGATTCCTAATATGCGCTAC
AAGCTTCCAAAGATTGAGGACAGAGATTCTTTGTCCTATACAGTTTGCTC
CATCTCAGAGGAGCATCTCATCTGTCTTTTCTCCATGTTCTCAGCATGGA
GGGGTGACAAGAAGAGAGCTGTGATCTCATCGGGCTCTTTGCAGAGTGGA
TTTCATCTTCATTTCTTCCTCTTCCCATTAGGGCACCCACTCCTGTGGAA
GCCAGTTCTTTTCTGTGCCCACTAAACTCGAATCAATTCTAGATATATAT
ATTTTTTTTACATCTCACCCCCCCAAACAATTCTCCCCAGAACAATTTAT
ATTTTTCGTATTGCTTCTGATAAAATCTGACTAATTTCTATGTGTATAAT
AACAAATGGGGTTGTCTGCCTCATTTACACTTCACTGCAGTTTCATCTCT
GGTTTTATAAGGCCCCAAGTGGTAGCTTCCTGTGTTTTACCGTACAGCTG
CCCATTTCCAAATGATCAGAAAGATGGTCTTCCAGGATTGAGTCTAATGG
C

NNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCGGAGGAATACAGAATAGCT
GAGAAGCACCTGAAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGC
AAATCAAAACAACCCTGTGATTCCACCTCACACCAGCCAGAATGGCTAAG
TTCAAAAATTCAGGTGACAGCAGATGCTGGTGAGGATGTGGAGAAAGAGG
AACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTAGAGCCACTCTGGA
AATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGAT
CCCACAATACCTCTCCTGGGCATATATCCAGAAGATGTTCCAACTGATAA
GAAGGATCTTAGTATATGACTATTCACAAATACATACTGCACATATGGGT
TGTTGTTGTTATAATTAGTTAAAATGAGGTTATATTGGCGTAGACTAGGT
TCCTGATTGAACATAAACACTGATGGGCATAGAGAGAAGATGGTATGAAG
AGATGCTAGAAGAAGACAGGTATCTACATGCTAAAGGATATGATGAAACT
TTCCTTTTTTGCACAGCTCTCCAAAGAAACAGATGCTGCTGATATCTTGA
CTTTATGGTTGTAGTTGTCTAAACTTCATTGCAATAAATCCTT

Query= MSMg01no145_n20.b1 MSMg01no145_n20.b1 CHROMAT_FILE:
MSMg01no145_n20.b1 PHD_FILE: MSMg01no145_n20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:05 2005
         (629 letters)



>mm_chr12_91861917_91862951
          Length = 1035

 Score = 1131 bits (585), Expect = 0.0
 Identities = 611/627 (97%), Gaps = 14/627 (2%)
 Strand = Plus / Minus

                                                                       
Query: 9   tccccaccctctcctctctctttcacacacacacacacacacacacatacacacatatta 68
           ||||||||||| |||||||||||        |||||||||||||||||||||||||||||
Sbjct: 882 tccccaccctcccctctctcttt--------cacacacacacacacatacacacatatta 831

                                                                       
Query: 69  aaatttcttagagttggaagagaactactgatctagataaaatttaaggactgaacaata 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 aaatttcttagagttggaagagaactactgatctagataaaatttaaggactgaacaata 771

                                                                       
Query: 129 tcaatgattcctaatatgcgctacaagcttccaaagattgaggacagagattctttgtcc 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 tcaatgattcctaatatgcgctacaagcttccaaagattgaggacagagattctttgtcc 711

                                                                       
Query: 189 tatacagtttgctccatctcagaggagcatctcatctgtcttttctccatgttctcagca 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 tatacagtttgctccatctcagaggagcatctcatctgtcttttctccatgttctcagca 651

                                                                       
Query: 249 tggaggggtgacaagaagagagctgtgatctcatcgggctctttgcagagtggatttcat 308
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 650 tggaggggtgacaagaagagagctgtgatatcatcgggctctttgcagagtggatttcat 591

                                                                       
Query: 309 cttcatttcttcctcttcccattagggcacccactcctgtggaagccagttcttttctgt 368
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 cttcatttcttcctcttcccattagggcacccactcctgtggaagccagttcttttctgt 531

                                                                       
Query: 369 gcccactaaactcgaatcaattctagatatatatat-----t-ttttttacatctcaccc 422
           ||||||||||||||||||||||||||||||||||||     | |||||||||||||||||
Sbjct: 530 gcccactaaactcgaatcaattctagatatatatatatatatattttttacatctcaccc 471

                                                                       
Query: 423 ccccaaacaattctccccagaacaatttatatttttcgtattgcttctgataaaatctga 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ccccaaacaattctccccagaacaatttatatttttcgtattgcttctgataaaatctga 411

                                                                       
Query: 483 ctaatttctatgtgtataataacaaatggggttgtctgcctcatttacacttcactgcag 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ctaatttctatgtgtataataacaaatggggttgtctgcctcatttacacttcactgcag 351

                                                                       
Query: 543 tttcatctctggttttataaggccccaagtggtagcttcctgtgttttaccgtacagctg 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tttcatctctggttttataaggccccaagtggtagcttcctgtgttttaccgtacagctg 291

                                      
Query: 603 cccatttccaaatgatcagaaagatgg 629
           |||||||||||||||||||||||||||
Sbjct: 290 cccatttccaaatgatcagaaagatgg 264


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1035
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1025
Effective search space:   634475
Effective search space used:   634475
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)