Query= MSMg01no147_c22.b1 MSMg01no147_c22.b1 CHROMAT_FILE:
MSMg01no147_c22.b1 PHD_FILE: MSMg01no147_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:42 2005
(174 letters)
>mm_chr12_12033301_12033870
Length = 570
Score = 261 bits (135), Expect = 2e-74
Identities = 163/177 (92%), Gaps = 10/177 (5%)
Strand = Plus / Plus
Query: 1 tacatttattgggtacttaattctaagcagcctttgtggtagctattcaataaacacaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tacatttattgggtacttaattctaagcagcctttgtggtagctattcaacaaacacaaa 260
Query: 61 agaaccgccaccttc-tgtagtgtccaaaatgctaagaaattagaaagt--gtttttcct 117
||||| ||||||||| ||||||| |||||||||||||||| || |||||||||
Sbjct: 261 agaactgccaccttcctgtagtgcccaaaatgctaagaaa-------gtctgtttttcct 313
Query: 118 gcacacaggtgacatttttgtcctggggtctggcctcaatgacaaattttgtctttc 174
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 314 gcacacaggtgacatttttgtcctggggtctggcctcaatggcaaattttgtctttc 370
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 570
Length adjustment: 8
Effective length of query: 166
Effective length of database: 562
Effective search space: 93292
Effective search space used: 93292
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no147_c22.g1 MSMg01no147_c22.g1 CHROMAT_FILE:
MSMg01no147_c22.g1 PHD_FILE: MSMg01no147_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:42 2005
(303 letters)
>mm_chr12_12182914_12183616
Length = 703
Score = 542 bits (280), Expect = e-158
Identities = 289/292 (98%)
Strand = Plus / Minus
Query: 1 cttctcatcccctgggagctagcaccccaccgcctttgcaaaatatctgagttacatttt 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 464 cttctcatcccctgggagctagcaccctaccgcctttgcaaaatatctgagttacatttt 405
Query: 61 tgcagatcgtcaagcttcaagggcattcaaacgaccttctagaggactgcagtgtcttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tgcagatcgtcaagcttcaagggcattcaaacgaccttctagaggactgcagtgtcttgg 345
Query: 121 taagtgatgccccctggtggccaaatggagtagttacaattcgcagggaccatgaagtaa 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 344 taagtgatgccccctggtggccaaatggagtagttgcaattcgcagggaccatgaagtaa 285
Query: 181 gaaccctggctttgtaatggccatgaggctctgttcagcagatgtcccactgtccctgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gaaccctggctttgtaatggccatgaggctctgttcagcagatgtcccactgtccctgaa 225
Query: 241 gggttggctgaagggcaacagggttgtgtgtgtgtgtgtgtgtgtgtgtgtg 292
|| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ggattggctgaagggcaacagggttgtgtgtgtgtgtgtgtgtgtgtgtgtg 173
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space: 204036
Effective search space used: 204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
