Query= MSMg01no148_m24.b1 MSMg01no148_m24.b1 CHROMAT_FILE:
MSMg01no148_m24.b1 PHD_FILE: MSMg01no148_m24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:50 2005
(222 letters)
>mm_chr12_100194399_100195020
Length = 622
Score = 364 bits (188), Expect = e-105
Identities = 200/210 (95%), Gaps = 10/210 (4%)
Strand = Plus / Minus
Query: 5 gaattcagagcaagatacaaaaaaaaaaaaaaaaaggagctttggagaatgggatgccag 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 428 gaattcagagcaag----------aaaaaaaaaaaggagctttggagaatgggatgccag 379
Query: 65 agaggcaaagagattcagtagttgagtaacttctgccttcaaggaacacaactcaacagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agaggcaaagagattcagtagttgagtaacttctgccttcaaggaacacaactcaacagc 319
Query: 125 tctaacatcgctttaccttctagtaattaaaacttttcttcatattttaactgcttatct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tctaacatcgctttaccttctagtaattaaaacttttcttcatattttaactgcttatct 259
Query: 185 cacatctgtgggggagggagagggggaggg 214
||||||||||||||||||||||||||||||
Sbjct: 258 cacatctgtgggggagggagagggggaggg 229
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 622
Length adjustment: 9
Effective length of query: 213
Effective length of database: 613
Effective search space: 130569
Effective search space used: 130569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no148_m24.g1 MSMg01no148_m24.g1 CHROMAT_FILE:
MSMg01no148_m24.g1 PHD_FILE: MSMg01no148_m24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:50 2005
(244 letters)
>mm_chr12_100039494_100040137
Length = 644
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%)
Strand = Plus / Plus
Query: 1 cagggcagtcagggctacacagtgcatcttttcatcatttaagggataaaggccagtggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagggcagtcagggctacacagtgcatcttttcatcatttaagggataaaggccagtggc 260
Query: 61 aggccaacctgtgtagtgtgtgtcatatgtgcagatgtgtatgtttgtatctttttacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggccaacctgtgtagtgtgtgtcatatgtgcagatgtgtatgtttgtatctttttacag 320
Query: 121 gtaagggatgtggttctgaaacaggtcatctatgcagtatgtgctatgtgtatatgtagg 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtacgggatgtggttctgaaacaggtcatctatgcagtatgtgctatgtgtatatgtagg 380
Query: 181 gtgtgtgtatatgtgttttatatgttcacgggtgtgtatatgtgtgagtgtttacatgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtgtgtatatgtgttttatatgttcacgggtgtgtatatgtgtgagtgtttacatgta 440
Query: 241 tgtg 244
||||
Sbjct: 441 tgtg 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
