Query= MSMg01no150_i03.b1 MSMg01no150_i03.b1 CHROMAT_FILE:
MSMg01no150_i03.b1 PHD_FILE: MSMg01no150_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:05 2005
(494 letters)
>mm_chr12_7565596_7566489
Length = 894
Score = 924 bits (478), Expect = 0.0
Identities = 487/490 (99%)
Strand = Plus / Minus
Query: 5 gaattctacagcattgtccaaggtgcttctctgtgcatagttgtcatctgttccttgggc 64
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 694 gaattctacagcattgtcccaggtgcttctctgtgcatagttgtcatctgttccttaggc 635
Query: 65 catcactgtttctttcttgtcctctttatgatatcttcttttaaagaaagatttcttcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 catcactgtttctttcttgtcctctttatgatatcttcttttaaagaaagatttcttcca 575
Query: 125 aatgcctacatcaaatctcaagttatcaccaggaaatcatgctttccagcctagcctctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 aatgcctacatcaaatctcaagttatcaccaggaaatcatgctttccagcctagcctctt 515
Query: 185 gacacacactgatcccagatcctcctggtacatggctggacaatatatagtgtaaatact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gacacacactgatcccagatcctcctggtacatggctggacaatatatagtgtaaatact 455
Query: 245 tcaataaatatctaggtctttatcctttaaagcaatgatatgataatagacaaaaattac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tcaataaatatctaggtctttatcctttaaagcaatgatatgataatagacaaaaattac 395
Query: 305 atataacaggaagataatgtcacactgtagagggtagagtgggtatcagcagcagcactg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 atataacaggaagataatgtcacactgtagagggtagagtgggtatcagcagcagcactg 335
Query: 365 ttaactgaaccctccttgtgatctgtggtatccaacaataaaagaaacaggcttcactca 424
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 334 ttaactgaaccctccttgtgatctgtggtatccagcaataaaagaaacaggcttcactca 275
Query: 425 aaaggatcaggcttgctcactgctttccagattagctttcccctcatacctctgtgtctc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaggatcaggcttgctcactgctttccagattagctttcccctcatacctctgtgtctc 215
Query: 485 tggtgtgtat 494
||||||||||
Sbjct: 214 tggtgtgtat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_i03.g1 MSMg01no150_i03.g1 CHROMAT_FILE:
MSMg01no150_i03.g1 PHD_FILE: MSMg01no150_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:05 2005
(523 letters)
>mm_chr12_7406574_7407496
Length = 923
Score = 996 bits (515), Expect = 0.0
Identities = 521/523 (99%)
Strand = Plus / Plus
Query: 1 aatattaaggaaggaatttcagacagagaaagaactagaatccatcacctgaaatgggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatattaaggaaggaatttcagacagagaaagaactagaatccatcacctgaaatgggtg 260
Query: 61 cttttctcaagtaatgtgcctgagaaaataaatgaagatcaaggtagcaagagtcttgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttttctcaagtaatgtgcctgagaaaataaatgaagatcaaggtagcaagagtcttgtg 320
Query: 121 atgaaatccataggagttgtaggatatttttttcttggtaaagaaaggacagtatagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgaaatccataggagttgtaggatatttttttcttggtaaagaaaggacagtatagtct 380
Query: 181 taggattctgtgaactagttgatatttcagagatagtttacaattagttatgatagagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taggattctgtgaactagttgatatttcagagatagtttacaattagttatgatagagat 440
Query: 241 atttacaccaggaaagtagacaaatgctataaattaggttttttttcaatcaatctccag 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 atttacaccaggaaagtagacaaatgctataaattaggttttctttcaatcaatctccag 500
Query: 301 gcattactcccattctacctccattcagaaagcttgctgaacatttataggatggcccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcattactcccattctacctccattcagaaagcttgctgaacatttataggatggcccag 560
Query: 361 actagagacaatatattcatttgtgttttattagttagggagtgaggaaaatctgaagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actagagacaatatattcatttgtgttttattagttagggagtgaggaaaatctgaagct 620
Query: 421 actgcttgagggcctttggcataatagaaagtcttttaaaccagggcaaaggtgacatca 480
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 621 actgcttgagggcctttggcataatagagagtcttttaaaccagggcaaaggtgacatca 680
Query: 481 tccaaggagagttcgaagaaaggagaaaattaggatatacagt 523
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tccaaggagagttcgaagaaaggagaaaattaggatatacagt 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
