TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGCAAGAGAATCCGCGG
AATTCTGAATTTTCCTACTAAACTAAGTAACTGGAAAGATATTCAATGCG
TGCAAAAAATAGCACACTATATGAATTAATTGGGACATTTATAGTTGATG
TGGTTTCACAGAGTGTTTATGTTGTATGAAGCTAACACTTTTCTGTTTCG
TAATCTGTTACTTACAAGAAAGCCATACATGCACACCACCTTTTCCATTT
TTCTTTTTTCTTTTATTTTTATTTTCTATATATTCTCTTTATTTACATTT
CAAATGTTATTGTTAATATAATTCCTCTACCCCTTACCCCCTCCCCCTGA
TTCCCAACCCACCTATCCTAGGCTGTCCCTAGATCAAGGACATTTATTTG
ACCTAGGGTGTCTAATCCCCACCTTAGGGCATTCAGATCTGTCATCTAAG
GCTGTTTTTTTCTTCTAATCCCCCTCTCAATGGGAAGCTCTTTTCTGAGT
CAGGCTGGCTTTCCTTGTTCTCTCATAGAATTGCTAACTTTTAAAGCAGG
CCCCCATAATTTTGGATACTTTTTGAATTCCTTGAATGGGATGTTTTGGC
AACGTAACGCCAAACCCCCCGGTTAGAAAATTAATCATCTTATACACAGT
TATCCCAAAATCAGGGATAAAAAGCAATTGGCGCAAAAACAAAACATTTA
CCGTTAATCTTTG

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAAGGCCCATACCTAAACATGATAAAAG
CAATCTAAAGCAAACCAGTATCCAACATCAAAGTAAATGGAGAGAAGCTG
GAAGCAATCCCACTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCC
CTACCTTTTCAACATAGTACTTGAAGTATTAGCCAGAGCAATTCGACAAC
AAAAGGAGATCAAGGGGATACAAATTGGAAAAGAGGAAGTCAAAATATCA
CTTTTTGCAGATGATATGATAGTATATATAAGTGACCCCAAAAATTCCAC
CAGAGAACTCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGATATA
AAATAAACTCAAACAAGCCAACGTCCTTTCTCTATACAAAGAATAAACAG
GCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGTCACAAATAA
TATAAAATATCTCGGCATGACTCTAACTAAGGAAGTGAAAGATCTGTATG
ATAAAAACTTCAAGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGA
TGGAAGGATCTCCCATGTTCATGGATTGGCAGGATCAACATTGTAAAAAT
GGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATCGAAA
TTCCAACGGAATTCTTCAN

Query= MSMg01no150_l20.b1 MSMg01no150_l20.b1 CHROMAT_FILE:
MSMg01no150_l20.b1 PHD_FILE: MSMg01no150_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:22 2005
         (502 letters)



>mm_chr12_6259505_6260406
          Length = 902

 Score =  851 bits (440), Expect = 0.0
 Identities = 481/502 (95%), Gaps = 15/502 (2%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattctgaattttccta--ctaaactaagtaactggaaagatattcaatgcgtgcaaaa 64
           ||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctgaattt-cctatactaaactaagtaactggaaagatattcaatgcgtgcaaaa 264

                                                                       
Query: 65  aatagcacactatatgaattaattgggacatttatagttgatgtggtttcacagagtgtt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatagcacactatatgaattaattgggacatttatagttgatgtggtttcacagagtgtt 324

                                                                       
Query: 125 tatgttgtatgaagctaacacttttctgtttcgtaatctgttacttacaagaaagccata 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatgttgtatgaagctaacacttttctgtttcgtaatctgttacttacaagaaagccata 384

                                                                       
Query: 185 catgcacaccaccttttccatttttcttttttcttttatttttattttctatatattctc 244
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 385 catgcacaccaccttttccatttttcttttttcttttacttttattttctatatattctc 444

                                                                       
Query: 245 tttatttacatttcaaatgttattgttaatataattcctctaccccttaccccctccccc 304
           |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 445 tttatttacatttcaaatgttattgttaatataaatcccctaccccttaccccctccccc 504

                                                                       
Query: 305 tgattcccaacccacctatcctaggctgtccctagatcaaggacatttatttgacctagg 364
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 505 tgattcccaacccacctatcctaggctgtccctagatcaaggtcatttatttgacctagg 564

                                                                       
Query: 365 gtgtctaatccccacct------tagggcattcagatctgtcatctaaggctgttttttt 418
           ||||||||||      |      |||||||||||||||||||||||| ||||||||||||
Sbjct: 565 gtgtctaatc------tgatttttagggcattcagatctgtcatctagggctgttttttt 618

                                                                       
Query: 419 cttctaatccccctctcaatgggaagctcttttctgagtcaggctggctttccttgttct 478
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 cttctaatcctcctctcaatgggaagctcttttctgagtcaggctggctttccttgttct 678

                                 
Query: 479 ctcatagaattgctaactttta 500
           ||||||||||||||||||||||
Sbjct: 679 ctcatagaattgctaactttta 700


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space:   438864
Effective search space used:   438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)