Query= MSMg01no151_c02.b1 MSMg01no151_c02.b1 CHROMAT_FILE:
MSMg01no151_c02.b1 PHD_FILE: MSMg01no151_c02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:52 2005
(626 letters)
>mm_chr12_93418641_93419666
Length = 1026
Score = 1087 bits (562), Expect = 0.0
Identities = 607/626 (96%), Gaps = 8/626 (1%)
Strand = Plus / Plus
Query: 5 gaattcccatgattcttagtatactttctgagtacacaactactatacataccatgtgag 64
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 205 gaattcccatgattcttagtatactttctgagtacacaactactatacataacatgtgag 264
Query: 65 ggtgttctggacaccttcttccgtaaccagagttgacattttcaagttttgaaataggaa 124
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggtgtcctggacaccttcttccgtaaccagagttgacattttcaagttttgaaataggaa 324
Query: 125 gagttatatagtgtaagagtatactcaaaaggtacatggactaagggacctttgggtaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagttatatagtgtaagagtatactcaaaaggtacatggactaagggacctttgggtaat 384
Query: 185 aggtcaaataatgaaaagtttagtggtgtcagttttaactactcaaataggtagcaaagt 244
|||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 385 aggtcaaataatgaaaagtttagtggtgtcggttttaactacttaaataggtagcaaagt 444
Query: 245 gggaaagtctatgtaatgagtgagcatggtgatgttccagtaaaccttatgggcaccaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gggaaagtctatgtaatgagtgagcatggtgatgttccagtaaaccttatgggcaccaaa 504
Query: 305 attgaactttatgcaatattcatttgtgttgatgaaatagtctgtttcttaggtgctatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attgaactttatgcaatattcatttgtgttgatgaaatagtctgtttcttaggtgctatt 564
Query: 365 ttcaaccccccac----actaaacccattgtaactacttaggttactaaagacaaagtta 420
|||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttcaaca----acttaaactaaacccattgtaactacttaggttactaaagacaaagtta 620
Query: 421 gtaaggtgaaacaaacctattaaaaacaaccaagatggaagaggagatgtggcctgtgtt 480
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 621 gtaaggtgaaacaaacctattaaaaacaaccaagaaggcagaggagatgtggcctgtgtt 680
Query: 481 ctacacttttctaaatttccctctatgcgctatgcactcagtgattagaatataaacgcc 540
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 681 ctacacttttctaaatttccctctatgggctatgcactcagtgattagaatataaacgcc 740
Query: 541 ccatataatggctatagatatcacaaggccttcgacttttggaggtacggcagcctttgt 600
|||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||
Sbjct: 741 ccatataatggctatagatatcacaagggcttcgacttttggaggtatgacagcctttgt 800
Query: 601 gttgttagtcgtctgcaggactgagg 626
||||||||||||||||||||||||||
Sbjct: 801 gttgttagtcgtctgcaggactgagg 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_c02.g1 MSMg01no151_c02.g1 CHROMAT_FILE:
MSMg01no151_c02.g1 PHD_FILE: MSMg01no151_c02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:52 2005
(348 letters)
>mm_chr12_93527584_93528331
Length = 748
Score = 526 bits (272), Expect = e-154
Identities = 330/350 (94%), Gaps = 5/350 (1%)
Strand = Plus / Minus
Query: 1 tttattcttcattgttcaacacatttt-aatgctgaaaagtgaagaagactgcttcagtt 59
||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 650 tttattcttgactgttcaacacattttcaatgctgaaaagtgaagaagactgcttcaatt 591
Query: 60 aaacagttaaaaattgtacaaaaaaaaaaaaaaaaaaaaaaaaacctttgccaaaaacat 119
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 590 aaacagttaaaaattgt--aaaaaaaaaaaaaaaaaaaaaaaaacctttgctaaaaacac 533
Query: 120 aataaacattatcaataaaatgtttggatgctgttaacagcaaataataaaacatccatg 179
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 532 aatagacattatcaataaaatgcttggatgctgttaacagcaaataataaaacatccatg 473
Query: 180 tccttattgctttttgatcacagcaaatacattaagtgtga-aaaacttaaagaaaggca 238
|||||||||||||||||||||| || ||||||||||||||| |||| |||||||||||||
Sbjct: 472 tccttattgctttttgatcacaacagatacattaagtgtgagaaaa-ttaaagaaaggca 414
Query: 239 atgtactcccaaagactaaaacactttgatgtactcttcaggaagatatgaagcacacta 298
||||||||||||||||||| ||||| | ||||||||||||| ||||||||||| ||||||
Sbjct: 413 atgtactcccaaagactaagacactctaatgtactcttcagaaagatatgaaggacacta 354
Query: 299 aataagatagatccttcaaagaaaacttcctatttcctaatagttcattc 348
||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 353 aataagatagatccttcaaagaaaaattcctatttcctaatagttcattc 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
