Query= MSMg01no152_n16.b1 MSMg01no152_n16.b1 CHROMAT_FILE:
MSMg01no152_n16.b1 PHD_FILE: MSMg01no152_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:04 2005
(483 letters)
>mm_chr12_87224431_87225313
Length = 883
Score = 872 bits (451), Expect = 0.0
Identities = 472/479 (98%)
Strand = Plus / Minus
Query: 5 gaattctagaaaggttccagcaaggtcccacaggagaatgaactgagtaagagggggaac 64
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gaattctagaaagggtagagcaaggtcccacaggagaatgaactgagtaagagggggaac 469
Query: 65 cctaagagctgaccttttacctcacccacagaatcactatggcatctagctagctaacgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 cctaagagctgaccttttacctcacccacagaatcactatggcatctagctagctaacgc 409
Query: 125 ctgtaacgctaggtctgaaaggagtgtctcagactgggcgctgtggactcggcagaaaca 184
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ctggaacgctaggtctgaaaggagtgtctcagactgggcgctgtggactcggcagaaaca 349
Query: 185 gtgctcttttccaagcctgatccgctaaaaaaaatgatgtcattgttcctgagatccagt 244
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 348 gtgctcttttccaagcctgatccgctagaaaaaatgatgtcattgttcctgagatccagt 289
Query: 245 tccaggacagcacaggagagtccagggtgtgagcatgccagaatgggcggactcatcaga 304
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 288 tccaggacagcacaggagagtcgagggtgtgagcatgccagaatgggcggactcatcaga 229
Query: 305 gtcagctttatgtgagtggagaaagggccagatagatggcctcaaatttggcctggccat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gtcagctttatgtgagtggagaaagggccagatagatggcctcaaatttggcctggccat 169
Query: 365 ttattagccacatgacccaagacaacttccttaagcttgctgactcgttccccttctcaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 ttattagccacatgacccaagacaacttccttaagcttgctgactcgttccccttctcaa 109
Query: 425 taaccaaggcttttatgatatatggttggcagtaagtaccaacaatgttgttaaataca 483
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 108 taaccaaggcttttatgatatatggttggtagtaagtaccaacaatgttgttaaataca 50
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space: 412929
Effective search space used: 412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no152_n16.g1 MSMg01no152_n16.g1 CHROMAT_FILE:
MSMg01no152_n16.g1 PHD_FILE: MSMg01no152_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:04 2005
(640 letters)
>mm_chr12_87114837_87115883
Length = 1047
Score = 1166 bits (603), Expect = 0.0
Identities = 633/647 (97%), Gaps = 7/647 (1%)
Strand = Plus / Plus
Query: 1 agaggcagttttcccaagcaaagcaattcagtgggaagctgagagaagccagtgtgaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaggcagttttcccaagcaaagcaattcagtgggaagctgagagaagccagtgtgaatc 260
Query: 61 agtcatctctggagaggagttttgaaccacaacagctgagttgaaccagccggagttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 agtcatctctggagaggagttttgaaccacaacagctgagttgaaccagccagagttcag 320
Query: 121 aaagaactagaaaggctgagtttattagcagtaagtctctgagatgacaattacatctgg 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagaactaggaaggctgagtttattagcagtaagtctctgagatgacaattacatctgg 380
Query: 181 ctaataaaagttacttttacgaatatctaatatgcagaatgtctgatatgtgattcctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaataaaagttacttttacgaatatctaatatgcagaatgtctgatatgtgattcctat 440
Query: 241 gaaacgggtcgtgaccctacaggttgagaaccacttccctaagctcttgtcccccttctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaacgggtcgtgaccctacaggttgagaaccacttccctaagctcttgtcccccttctc 500
Query: 301 aaggacccaggaaccccaagaatgacacaacagtgtaaaccattcagcataatcccagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaggacccaggaaccccaagaatgacacaacagtgtaaaccattcagcataatcccagct 560
Query: 361 ctgaggacaaatctagtgatttgatggaactataaggaagtctggatctaatcagctgcc 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 ctgaggacaaatctagtgatttgatggaactataaggaagtctgtatctaatcagctgcc 620
Query: 421 tgtggccttgttt-------tctcccacaataaggctccgccttcagatccacaaactcc 473
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 tgtggccttgtttcctccgttctcccacaataaggctccaccttcagatccacaaactcc 680
Query: 474 tttcatgagtgatttcccataaatcaatggggtcatttttgttcacaaaagtctgctact 533
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 681 tttcatgagtgatttcccataaatcaatggggtcatttttgttcacaaaagcctgctact 740
Query: 534 tccttaatcccaaatggccttttcaaaagaagccaaggacctggattttgggatttcaga 593
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tccttaatcctaaatggccttttcaaaagaagccaaggacctggattttgggatttcaga 800
Query: 594 tgtcatctgactaggctttgcatgtgtgatcattaaggtacaccagg 640
||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 801 tgtcatctgactaggctttgcatgtgtgatcattacggtacaccagg 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1047
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1037
Effective search space: 653310
Effective search space used: 653310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
