Query= MSMg01no153_e18.b1 MSMg01no153_e18.b1 CHROMAT_FILE:
MSMg01no153_e18.b1 PHD_FILE: MSMg01no153_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:38 2005
(609 letters)
>mm_chr12_104228621_104229627
Length = 1007
Score = 1104 bits (571), Expect = 0.0
Identities = 597/607 (98%), Gaps = 4/607 (0%)
Strand = Plus / Minus
Query: 4 ggaattccatgatagataccctaatgc-aaacacttacaactgaattcaaatgtaaactt 62
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 807 ggaattccatgatagaaaccctaatgcaaaacacttacaactgaattcaaatgtaaactt 748
Query: 63 atttttagctttgtggcttgatatccctacacgaactgtctgttccttttcaatcactaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 atttttagctttgtggcttgatatccctacacgaactgtctgttccttttcaatcactaa 688
Query: 123 ggagagcattattctaatctcttcctaattatctacagattagcttcctcttagcaaaat 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ggagagcattattctaatctcttcctaattatctacagattagcttcctcttagcaa--- 631
Query: 183 aataataataaatgtaaacctctggcactagaaagttatggctgatatgaaggaaaaaaa 242
||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 630 aatgataataaatgtaaacctctgtcactagaaagttatggctaatatgaaggaaaaaaa 571
Query: 243 cttgacactctaaaacacccaaaaagttgggtgtccactgtgcaatggcatcaattaaaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 cttgacactctaaaacacccaaaaagttgggtgtccactgtgcaatggcatcaattaaaa 511
Query: 303 tcaggttctctttagaacagtagtgattatgaaagtgtgtttaatgaaggcttagctgca 362
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tcaggttctctttagctcagtagtgattatgaaagtgtgtttaatgaaggcttagctgca 451
Query: 363 tgactgtggtgaggatatattcacttgttgagtatcaaggcagaacacaatgactatgtt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tgactgtggtgaggatatattcacttgttgagtatcaaggcagaacacaatgactatgtt 391
Query: 423 gtaataaaaacacaaacaataaagatcacatttttcttccaatgaattgcatatattagg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gtaataaaaacacaaacaataaagatcacatttttcttccaatgaattgcatatattagg 331
Query: 483 aaccatcccaatagctttctgagcttggcttcccagtctcaagacaggagggactaaaca 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 aaccatcccaatagctttctgagcttggcttcccagtctcaagacaggagggactaaaca 271
Query: 543 tgtgtatttaccctcctacacctacctggagtcaccagcattgtccacattcctgacctg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgtgtatttaccctcctacacctacctggagtcaccagcattgtccacattcctgacctg 211
Query: 603 acctttg 609
|||||||
Sbjct: 210 acctttg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1007
Length adjustment: 10
Effective length of query: 599
Effective length of database: 997
Effective search space: 597203
Effective search space used: 597203
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_e18.g1 MSMg01no153_e18.g1 CHROMAT_FILE:
MSMg01no153_e18.g1 PHD_FILE: MSMg01no153_e18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:38 2005
(514 letters)
>mm_chr12_104127225_104128138
Length = 914
Score = 905 bits (468), Expect = 0.0
Identities = 497/514 (96%), Gaps = 12/514 (2%)
Strand = Plus / Plus
Query: 1 ttccgagagttgttccctaggctgctttctgcagcggctccactcttccatccctttact 60
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ttccgagagttgttccctaggctgctttctgcagcggctccactcttc------------ 260
Query: 61 ttgctcatggtggttcatttctctccctccctcttcctccctctcccttaactgaagctc 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 ttgctcatggtggttcatttctctccctccctcttcctccctctcccctaactgaagctc 320
Query: 121 ctcgccaggcttcaaagggaagacacttatttcctttaaggctccatcaagttcagactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcgccaggcttcaaagggaagacacttatttcctttaaggctccatcaagttcagactt 380
Query: 181 ctccatgcattgaattgtttctaatgctcttcttccaccttgagatgtgctcatagcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctccatgcattgaattgtttctaatgctcttcttccaccttgagatgtgctcatagcctg 440
Query: 241 gagagcctttcattataataaactttatttctgacgggcatgcgtgtgttagttttcctt 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 gagagcctttcattataataaactttatttctgaagggcatgcgtgtgttagttttcctt 500
Query: 301 tacagacagaccactgaggccttttgtttatctttactacaagaacctggaaaatcccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacagacagaccactgaggccttttgtttatctttactacaagaacctggaaaatcccag 560
Query: 361 taggtgccttctggagagctgagtcagttttctctaagaaaacccctgctaagctgacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taggtgccttctggagagctgagtcagttttctctaagaaaacccctgctaagctgacca 620
Query: 421 tgtgcccgtggaaggccatacatccaagactatatgggtagcacaaagcagacttgatgg 480
|| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgcgccaggggaaggccatacatccaagactatatgggtagcacaaagcagacttgatgg 680
Query: 481 gtttttttaaaaagacacagagttgagcaggtag 514
||||||||||||||||||||||||||||||||||
Sbjct: 681 gtttttttaaaaagacacagagttgagcaggtag 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
