Query= MSMg01no154_b13.b1 MSMg01no154_b13.b1 CHROMAT_FILE:
MSMg01no154_b13.b1 PHD_FILE: MSMg01no154_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:38 2005
(662 letters)
>mm_chr12_118126685_118127744
Length = 1060
Score = 1216 bits (629), Expect = 0.0
Identities = 651/659 (98%), Gaps = 2/659 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcctttcctttctgttctaaacagctcttctctgatataattaacaaccccag 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 ggaattctcctttcatttctgttctaaacagctcttctctgatataattaacaaccccag 801
Query: 64 gcatgcagctcacagaacaatttatgagccttatacaatgtgaggcaagcaagcacaaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gcatgcagctcacagaacaatttatgagccttatacaatgtgaggcaagcaagcacaaga 741
Query: 124 cagcaggcctgaagtccagaacttacttgatatctgcaaagaagctggaaggtacccgga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cagcaggcctgaagtccagaacttacttgatatctgcaaagaagctggaaggtacccgga 681
Query: 184 ggatgtgggcaacttggtccatcagctgcttcccctcctctggacttagagggctggaga 243
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 680 ggatgtgggcaacttggtccatcagctgcttccccttctctggacttagagggctggaga 621
Query: 244 agaggaagaggaataccattactaaagcagagcatcaagtcttaggggagaagactctca 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 620 agaggaagaggaataccattactaaagcagagcatcaagtcttaggggagaaga--ctca 563
Query: 304 gatcttcgctaccttttgctatcaaacttggtcagtcctggggactcatggttccccaac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gatcttcgctaccttttgctatcaaacttggtcagtcctggggactcatggttccccaac 503
Query: 364 atgtgccctgatccaaggccctgctatatttcctgctttggggtggtgactattgatccc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atgtgccctgatccaaggccctgctatatttcctgctttggggtggtgactattgatccc 443
Query: 424 caacagtactctggtttggaagaagatgttcctccctcctggtgggtgccctgctactct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 caacagtactctggtttggaagaagatgttcctccctcctggtgggtgccctgctactct 383
Query: 484 gactgatccctttgctctgggatctgttctggggtgtactgtttccctatgcattccagc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gactgatccctttgctctgggatctgttctggggtgtactgtttccctatgcattccagc 323
Query: 544 tctgggagggccctcaacccttggcccacttgggagctgcggccactggatgcttgacac 603
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 322 tctgggagggttctcaacccttggcccacttgggagctgcggccactggatgcttgaccc 263
Query: 604 acattgggagatgtactgctccttgacacatgctttgctttggggtaactaccccctat 662
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 acattgggagatgcactgctccttgacacatgctttgctttggggtaactaccccctat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1060
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1050
Effective search space: 684600
Effective search space used: 684600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_b13.g1 MSMg01no154_b13.g1 CHROMAT_FILE:
MSMg01no154_b13.g1 PHD_FILE: MSMg01no154_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:38 2005
(580 letters)
>mm_chr12_118023262_118024241
Length = 980
Score = 1122 bits (580), Expect = 0.0
Identities = 580/580 (100%)
Strand = Plus / Plus
Query: 1 attcatgcacactgcaccgtgcacctccacttcaacgtggtaagggcagtgcttgtgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcatgcacactgcaccgtgcacctccacttcaacgtggtaagggcagtgcttgtgctg 260
Query: 61 taagatgattcttaaataaagaattcaagtttaataaagcattgcaattttttttttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagatgattcttaaataaagaattcaagtttaataaagcattgcaattttttttttctt 320
Query: 121 cctggctccatcttgtcaaaacacaattccagcatgggcagagacaggcatgaagtccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctggctccatcttgtcaaaacacaattccagcatgggcagagacaggcatgaagtccca 380
Query: 181 tgcctacctggggagtcatagtctgttgatggctgctgggagaaggagtcggttttcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcctacctggggagtcatagtctgttgatggctgctgggagaaggagtcggttttcctc 440
Query: 241 agagatgtagctggagagtctacatctgctccagtacagggtcctgtatctatgtccatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agagatgtagctggagagtctacatctgctccagtacagggtcctgtatctatgtccatg 500
Query: 301 ctgaaagcacactgaaaaaagatggactcttttttttttttaaagatttatttattgtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgaaagcacactgaaaaaagatggactcttttttttttttaaagatttatttattgtat 560
Query: 361 gtaaatacactgtagctgtcttcagacacaccagaagagggcatcagatttcatttcagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtaaatacactgtagctgtcttcagacacaccagaagagggcatcagatttcatttcagg 620
Query: 421 tggttgtgagccaccatgtggttgctgggatttgaactcaggacctttggaagagcagtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggttgtgagccaccatgtggttgctgggatttgaactcaggacctttggaagagcagtc 680
Query: 481 agtgctcttatccgttgagccatctcgccagcccaaagatggactcttaaaagaaggaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtgctcttatccgttgagccatctcgccagcccaaagatggactcttaaaagaaggaaa 740
Query: 541 aaaaaaaaaccatgaaatttggaaaaaatagtgattgggg 580
||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaaaaaaaaccatgaaatttggaaaaaatagtgattgggg 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
