CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTATGTAGTATACGGCCTGTGTGTAAGAACGTATTGTGAACTCAAGG
GCTGCACATCAATATTTGAACTTTTCAATTTCTAATCAATCATTTTAGTG
TACTTTTGATATGTTTTAAGTAGGCTTTCACCACCATATGCTATCAATGG
AAAGGCAAGTATTTTTTTTGTAGTGATTTTTATAGTGAATTATCAGCATA
CTGTGAAATTATGTAACCTTTCTGCATGATCTCAGGCAAGTTCTTGATAA
TTTACTGAAATTCTGTAAAATAAGTTGAGAATGTTGAATCCAGTATTAGG
AGTATTCTCATAAGGCTAACTACATAACACAAGCCCTCAGACAAGAGAGT
GTTTTGATATTAATTTATGTATTGTACACAGAAAGGCATATGCTTTTTGT
GTATGAAACATAAATTAATATCAAAACATATATTATCAAAAAATATATTA
CTATTTTGGTGTTTTTCTAGCACATCATTTTGTAATATTATATAGAAAGA
AGTTTTTATTCTCTATTCATATACTTATTACATTAGCATTTCTACATGCT
TTAATTGTTTTTATTGCTATGATAATACCTGGTGTCCAAAAGGGATTTTG
CAGGAAAAAAAGGTTTGGTTTCCAGTTCCAAGGGAGAGTTCTTAATTGAT
C

CGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATTTGTTTCATAACTTCTGTTAGTTTTAC
TGTGTCTCTGTTTAGTTTCTGTTTCCAGGATCTGTTCATTTATGAGAGTG
GGGTGTTGAAGTCTCTTAATATTATTGTGTGAGGTATAATGTGTGCTTTT
GTGTTTTTTACCTTTCATGTGTAAGAAGTGTCCCTCCTTATCTTTTTTGA
GAACTTTAGGTTGAAAGTCAATTTTATTCGATATTAGAATGGCTACTCCA
GCTTGTTTCTTGGGACTATTTGCTTGGAAAATTGGTTTCCAGCCTTTTAT
TCTAAGGTAGTATCTGTCTTTGTCTCTGAGTGGATTTCCTGTATGCAGTA
CAATGTTGGGGCCTCATTATATAACCAGTTTGTTACCCTATGTCTTTTTA
CTGGGGAATTGAGTCCATTTCATATTTAAAAAATGTGTTAAGGAAAAGTC
GCCGTTGCTTCCTGTTATATTTGTTACTACAGTTTAACTTCTGTTCATAT
GGCTATCTTCTTTACGTTTTCTGACATGGTACTTTCGCGCCTTTTTCTCT
AGTTTAAAATCCCTCCTTGGTGTTAAAATTTCCCCTTTTTTATTCCCTTG
AACGCCCAAATTCTTTTTCAAGATAATGACCTACATTTGTCTTTGTCCTC
GT

Query= MSMg01no154_i06.b1 MSMg01no154_i06.b1 CHROMAT_FILE:
MSMg01no154_i06.b1 PHD_FILE: MSMg01no154_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:10 2005
         (521 letters)



>mm_chr12_63963261_63964179
          Length = 919

 Score =  940 bits (486), Expect = 0.0
 Identities = 510/518 (98%), Gaps = 2/518 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctatgtagtatacggcctgtgtgtaagaacgtattgtgaactcaagggctgcac 63
           |||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 719 ggaattctatgtagaatatggcctgtgtgtaagaatgtattgtgaactcaagggctgcac 660

                                                                       
Query: 64  atcaatatttgaacttttcaatttctaatcaatcattttagtgtacttttgatatgtttt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 atcaatatttgaacttttcaatttctaatcaatcattttagtgtacttttgatatgtttt 600

                                                                       
Query: 124 aagtaggctttcaccaccatatgctatcaatggaaaggcaagtattttttttgtagtgat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aagtaggctttcaccaccatatgctatcaatggaaaggcaagtattttttttgtagtgat 540

                                                                       
Query: 184 ttttatagtgaattatcagcatactgtgaaattatgtaacctttctgcatgatctcaggc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ttttatagtgaattatcagcatactgtgaaattatgtaacctttctgcatgatctcaggc 480

                                                                       
Query: 244 aagttcttgataatttactgaaattctgtaaaataagttgagaatgttgaatccagtatt 303
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aagttcttgatgatttactgaaattctgtaaaataagttgagaatgttgaatccagtatt 420

                                                                       
Query: 304 aggagtattctcataaggctaactacataacacaagccctcagacaagagagtgttttga 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 aggagtattctcataaggctaactacataacacaagccctcagacaagagagtgttttga 360

                                                                       
Query: 364 tattaatttatgtattgtacacagaaaggcatatgctttttgtgtatgaaacataaatta 423
           ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 359 tattaatttatgtattgtacatagaaaggcatatgcttttt-tgtatgaaacataaatta 301

                                                                       
Query: 424 atatcaaaacatatattatcaaaaaatatattactattttggtgtttttctagcacatca 483
           |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 300 atatcaaaacatatattaccaaaaa-tatattactattttggtgtttttctagcacatca 242

                                                 
Query: 484 ttttgtaatattatatagaaagaagtttttattctcta 521
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttttgtaatattatatagaaagaagtttttattctcta 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 919
Length adjustment: 10
Effective length of query: 511
Effective length of database: 909
Effective search space:   464499
Effective search space used:   464499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)