Query= MSMg01no157_k17.b1 MSMg01no157_k17.b1 CHROMAT_FILE:
MSMg01no157_k17.b1 PHD_FILE: MSMg01no157_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:03 2005
(316 letters)
>mm_chr12_100624623_100625338
Length = 716
Score = 536 bits (277), Expect = e-157
Identities = 304/313 (97%)
Strand = Plus / Minus
Query: 4 ggaattctaagcttagagtacagccagcagaggtctagtcaggcccccagagctgtttgc 63
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 516 ggaattctaagcttagagtacagccagcagaggtcgagtcaggaccccagagctgtttgc 457
Query: 64 cactgaggaaagttaacacggtctttagctccagtcatcctttctgcacgttctagcgtg 123
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cactgaggaaagttaacagggcctttagctccagtcatcctttctgcacgttctagcgtg 397
Query: 124 cccgagtctccatgtttgacatgaaaccacagcacccacaagtaatgtagctagttcgaa 183
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cccgcgtctccacgtttgacatgaaaccacagcacccacaagtaatgtagctagttcgaa 337
Query: 184 ctctgaactgttaaacaggaccagctccaagcctgcagggagacttagagattatctact 243
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 336 ctctgaactgttaaacaggaccagcttcaagcctgcagggagacttagagattatctact 277
Query: 244 cctcttgctgccttgctaccaagccctggatggggcctgtcagatctcaccaggagggtc 303
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 276 cctcttgctgccttgctaccaagccctggatggtgcctgtcagagctcaccaggagggtc 217
Query: 304 cacccggctccct 316
|||||||||||||
Sbjct: 216 cacccggctccct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_k17.g1 MSMg01no157_k17.g1 CHROMAT_FILE:
MSMg01no157_k17.g1 PHD_FILE: MSMg01no157_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:03 2005
(291 letters)
>mm_chr12_100462206_100462895
Length = 690
Score = 499 bits (258), Expect = e-146
Identities = 282/290 (97%), Gaps = 2/290 (0%)
Strand = Plus / Plus
Query: 1 actagggactctgtcaaaaccagacggcactgaattgtgcatgcagagggaagctaagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actagggactctgtcaaaaccagacggcactgaattgtgcatgcagagggaagctaagac 260
Query: 61 tccgtgcaggggcttgtgaatgtgaccggagagaacccagagcaaaggcaagcagatgga 120
||||||||||||| |||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 261 tccgtgcaggggc-tgtgaatgtgactggagagaacccagagcaaaggcaagcggacgga 319
Query: 121 gaaaagaaaaggaggacacgacctctctagacatgggttgaggagcaagtttgcgtggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 320 gaaaagaaaaggaggacacgacctctctagacatgggttgaggagcaagtttgtgtggat 379
Query: 181 ataagggagaaaacaggcagaggcatccaggagagtccacagagggcatggccagcgaat 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ataagggagagaacaggcagaggcatccaggagagtccacagagggcatggccagcgaat 439
Query: 241 ggagcagggcatccttcataaggagaggaagagagaggagcctggagtgt 290
||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 440 ggagcaggg-atccatcataaggagaggaagagagaggagcctggagtgt 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
