Query= MSMg01no161_h08.b1 MSMg01no161_h08.b1 CHROMAT_FILE:
MSMg01no161_h08.b1 PHD_FILE: MSMg01no161_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:05 2005
(429 letters)
>mm_chr12_15439598_15440424
Length = 827
Score = 723 bits (374), Expect = 0.0
Identities = 399/408 (97%), Gaps = 2/408 (0%)
Strand = Plus / Plus
Query: 18 gaattctctaataagatcacagacattactgataactgtgaggtctcttcagttagggca 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gaattctctaataagatcacagacattactgataactgtgaggtctcttcagttagggca 277
Query: 78 gaaaaagaaatgaagaggcttcacacagggctattttcagaacttgttgccaaaaatcta 137
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 278 gaaaaagaaaggaagaggcttcacacagggctattttcagaactcgttgccaaaaagcta 337
Query: 138 aaagaaaagtaaatatataggatttaaagaaaagtaaatgtataggattagccagtttgt 197
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 338 aaagaaaagtaaatatataggatttaaagaaaagtaaatgtataggattggccagtttgt 397
Query: 198 tgttctgtatatcttggatggacaattatagagctgatcgtgaatcctcgtgttctgtga 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tgttctgtatatcttggatggacaattatagagctgatcgtgaatcctcgtgttctgtga 457
Query: 258 ctgggggttgtctaagagagagttccattatagcagatgaagcaaatgcacaccccgtaa 317
||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ctgggggatgtctaagagag--ttccattatagcagatgaagcaaatgcacaccccgtaa 515
Query: 318 aggtgttcacaagtattcaaaaatggggtttgatgaaaaacaacaagaacaacagcaaaa 377
||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 516 aggtgttcacaggtattcaaaaatggggtttgatgaaaaacaacaagaacaacagaaaaa 575
Query: 378 tacttaaaatataatttttgtgtgtctcagttttttctaaacctccca 425
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tacttaaaatataatttttgtgtgtctcagttttttctaaacctccca 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 827
Length adjustment: 9
Effective length of query: 420
Effective length of database: 818
Effective search space: 343560
Effective search space used: 343560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_h08.g1 MSMg01no161_h08.g1 CHROMAT_FILE:
MSMg01no161_h08.g1 PHD_FILE: MSMg01no161_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:05 2005
(385 letters)
>mm_chr12_15503419_15504203
Length = 785
Score = 717 bits (371), Expect = 0.0
Identities = 380/383 (99%)
Strand = Plus / Minus
Query: 1 aaattctcagtgaaaacttatatgtagagacatttttgaaaaagcagacagggcattctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 aaattctcagtgaaaacttatatgtagagacatttttgaaaaagcagacagggcattctt 524
Query: 61 tcctttatcattggcctattctttgaaggccttggaatgctcagtttccctgatgctggt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 523 tcctttatcattggcctattctttgaaggccttggaatgctcagtttccctgatgctgtt 464
Query: 121 agaactcttccaagcagcccagactcacagtggtaaaaagacggcttggtgtgagtattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 agaactcttccaagcagcccagactcacagtggtaaaaagacggcttggtgtgagtattc 404
Query: 181 gaaatgcaactctagagaacacatgtaccgcgttatcatccttacacccacaacctcctg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 taaatgcaactctagagaacacatgtaccgcgttatcatccttacacccacaacctcctg 344
Query: 241 tccacccgtgggttatgggaatcacatttgtataatccctggccaattatggaatgaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tccacccgtgggttatgggaatcacatttgtataatccctggccaattatggaatgaaaa 284
Query: 301 cttgaagaatgacctaaacatcttcactatacacttcgtctttcatagtagactcagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cttgaagaatgacctaaacatcttcactatacacttcgtctttcatagtagactcagaag 224
Query: 361 actaaaagaggttatcaaagttt 383
|||| ||||||||||||||||||
Sbjct: 223 actagaagaggttatcaaagttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
