Query= MSMg01no161_p07.b1 MSMg01no161_p07.b1 CHROMAT_FILE:
MSMg01no161_p07.b1 PHD_FILE: MSMg01no161_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:10 2005
(423 letters)
>mm_chr12_97949049_97949872
Length = 824
Score = 696 bits (360), Expect = 0.0
Identities = 396/408 (97%), Gaps = 1/408 (0%)
Strand = Plus / Plus
Query: 16 gaattc-aactcgggtcctcatttatacttgcaaaccagtctgtctccaaagtcattttg 74
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 216 gaattccaactcgggtcctcatttatacttgcaaaccagtctgtctccaaagtcgttttg 275
Query: 75 atcatactgatgcagctgatctattgtctctaacatactacattttgagtattttatatg 134
|||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 276 atcatactgatgcagctgttctattgtctctaacttactaccttttgagtattttatatg 335
Query: 135 aagtttgaatactgaagattagacaaatattaatgcaagatatctttcccccgactcttt 194
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 336 aagtttgaattctgaagattagacaaatattaatgcaagatatctttctcccgactcttt 395
Query: 195 aattataaaagagaaaggtgaagatgcttgggttcattgcccttactaacagcattacag 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aattataaaagagaaaggtgaagatgcttgggttcattgcccttactaacagcattacag 455
Query: 255 cgtgagtcagaaaagtctaatattttaaagagagcagatcccactcttgaacaggcccca 314
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 456 cgtgagtcagaaaagtctaatattttaaagagagcagattccactcttgaacaggcccca 515
Query: 315 actacacagcaaatcaatagacagttgtaagcaggatacagagaaataggtagaatttca 374
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 516 actacacagcaaatcaatagagagttgtaagcaggatacagagaaataggtagaaaaaca 575
Query: 375 acttcaagctatggttcatatctcttttaaataaatatttcaatgtct 422
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 acttcaagctatggttcatatctcttttaaataaatatttcaatgtct 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 824
Length adjustment: 9
Effective length of query: 414
Effective length of database: 815
Effective search space: 337410
Effective search space used: 337410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_p07.g1 MSMg01no161_p07.g1 CHROMAT_FILE:
MSMg01no161_p07.g1 PHD_FILE: MSMg01no161_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:10 2005
(380 letters)
>mm_chr12_97984108_97984888
Length = 781
Score = 714 bits (369), Expect = 0.0
Identities = 378/381 (99%), Gaps = 1/381 (0%)
Strand = Plus / Minus
Query: 1 aatatgcttgtatttcatttaacagtacatttgtttatttgtgagataattaatgtgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aatatgcttgtatttcatttaacagtacatttgtttatttgtgagataattaatgtgtag 325
Query: 61 cttgcatttgggtttttcttaatttagaaaactctaaactcatgttgatgcaatacaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cttgcatttgggtttttcttaatttagaaaactctaaactcatgttgatgcaatacaatt 265
Query: 121 taatatgttttcatctttctatttcctaggaatatttttgttgaattg-tttttttccag 179
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 264 taatatgttttcatctttctatttcctaggaatatttttgttgaattgttttttttccag 205
Query: 180 tttttctttatttttagatttttaattatataattcctgcctctgtttcctcctccaaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tttttctttatttttagatttttaattatataattcctgcctctgtttcctcctccaaac 145
Query: 240 attctcacaaaactctcctttctttatttaatatccatggcctctttttattattaattg 299
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 actctcacaaaactctcctttctttatttaatatccatggcctctttttattattaattg 85
Query: 300 ctacatataaatatgcatgtatatgcaaatataagtgtaaatatgtgtatatgaatatgc 359
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 ctacatacaaatatgcatgtatatgcaaatataagtgtaaatatgtgtatatgaatatgc 25
Query: 360 agatacctatattagcataat 380
|||||||||||||||||||||
Sbjct: 24 agatacctatattagcataat 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 781
Length adjustment: 9
Effective length of query: 371
Effective length of database: 772
Effective search space: 286412
Effective search space used: 286412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
