Query= MSMg01no161_p19.b1 MSMg01no161_p19.b1 CHROMAT_FILE:
MSMg01no161_p19.b1 PHD_FILE: MSMg01no161_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:14 2005
(422 letters)
>mm_chr12_36680611_36681428
Length = 818
Score = 642 bits (332), Expect = 0.0
Identities = 380/398 (95%), Gaps = 4/398 (1%)
Strand = Plus / Minus
Query: 15 ggaattccacagagaagggagattgctttaattttttccagtctgtctttgcatacacag 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 394 ggaattccacagagaagggagattgctttaattttttccagtctgtctttgcatacaaag 335
Query: 75 taacaaattcaatttctggcacaccctagaagaaaggtacttggtaattaggaaagatta 134
|||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 334 taacaaatgcaatttctggcacaaaatagaagaaagatacttggtaattaggaaagatta 275
Query: 135 aatattttaaaatatgatctttgtgtgtttttacttactcacatgaatatgcttcatttg 194
|||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 274 aatattttaaaatatgatctttgtgtgtttttactt----acatgaatgtgcttcatttg 219
Query: 195 tttgcttgtttttgtaacagggtctctcattggcctggagctggagcctgcctagctcta 254
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 218 tttgcttgtttttgtaacagggtctctcattggcctggagctggagcctgcttagctcta 159
Query: 255 gactggctgaccagtgagcttcaaagttccatgtgtatccattcagcacttctattacaa 314
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 158 gactggctgaccagtgagctgcagagttccatgtgtatccattcagcacttctattacaa 99
Query: 315 gtgggtagcactgtgcctaggtctatttacatgagttctgggatttgaactcatttcttc 374
|||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||
Sbjct: 98 gtgggtagcactgtgcctgggtctatttacatgagttctgggatttgaactcaggtcctc 39
Query: 375 atgatttcatggaaagcattttaccaactgagttctct 412
||||||||||||||||||||||||||||||||||||||
Sbjct: 38 atgatttcatggaaagcattttaccaactgagttctct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 818
Length adjustment: 9
Effective length of query: 413
Effective length of database: 809
Effective search space: 334117
Effective search space used: 334117
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_p19.g1 MSMg01no161_p19.g1 CHROMAT_FILE:
MSMg01no161_p19.g1 PHD_FILE: MSMg01no161_p19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:14 2005
(406 letters)
>mm_chr12_36556690_36557490
Length = 801
Score = 484 bits (250), Expect = e-141
Identities = 274/286 (95%), Gaps = 9/286 (3%)
Strand = Plus / Plus
Query: 1 aaagagattaatagtgaggaaaatatacaagttataatgggaagt--gggggaaaaaggc 58
||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 201 aaagagattaatagtgaggaaaatatacaagttataatgggaagtggggggg----aggt 256
Query: 59 acccatgtgtattttatttattaagtagtattataaaaatttggaaagagaagcaaacac 118
| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 257 atccatgtgtattttatttattaggtagtattataaaaatttggaaagagaagcaaacac 316
Query: 119 ctgtcttgattctgtgctgatgaaactatgtcttcagttatggcagcatgaactgttgac 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ctgtcttgattctgtgctgatgaaactatgtcttcagttatggcagcatgaactgttgac 376
Query: 179 caatgaccaaactctacacagaagaaacaggaaacatgagaagacttaccagaatccaca 238
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 377 caatgaccaaactctacacagaagaaacaggaaacatgaga---cttaccagaatccaca 433
Query: 239 gtagattctctctctctctctctctctctctctctctctctctctc 284
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gtagattctctctctctctctctctctctctctctctctctctctc 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 72
Number of extensions: 29
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 801
Length adjustment: 9
Effective length of query: 397
Effective length of database: 792
Effective search space: 314424
Effective search space used: 314424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
