CAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTGTGTTCGCGNAAAAGACACTCTATATGTCTTAAGGTTTGGTA
TAATGTTGCCCGTATTCTTCCCTGATCTGTGGGAGGACTGGGTGCTAAAA
ATCCAAAATAACAAGACCTTGGCTCTTAGAAAGGCCACATGGCAGTCATT
GATTTCAGAGCCTCTTGGGTTAGTCTGCTTGGTTGAGATGAGATTTATTT
AGGATGGATGAGGAGGGCAGTCTCTTGAAGTTTAAGACCTAACTGCTTTT
GGTTGGTTGGTAAGAAGAGTTTAATTTTCTTGGGGTAAAACTGTGGGGCT
GTTGTTTTTATAACAAACGAGCACCCCAGACTTAATCAGCCGGACGGTGG
TAGTGCACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTT
CTGAGTTTGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGG
GCTATACAGAGAAACCCTGTCTCGAAAAACCAAAAAAAAAAAAAAAAAAG
GGGGGGGGACTTGATGTGTACATGAGGATTTAAGACCATGAAGCATTGGA
AGAATATTCAGTCTTTTGTTTTGTAAGGTGTAGTATTAGTTGTGTTCTCC
TGTTTTTGTTGCTGTCCTGTTTTTTTGTTTTATTTTTGCTATN

ATCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAACTGATGACACCCCTAAAGAAA
TGTCAACTATGGGCGAGGTCACGAATTCAACAGTGGAGCCTTGTGATTGA
CTCTTCCATATGAACTCAAATGAGTGTCCACAGGTAAGGACTCCACTGTT
GATTTAATGGATTAAAAAAATTAGTTACAATTAAACACATGAGAATCTGT
GCCTAGAATGTTATAAGATCAATATGGAGACCAGATTTAAATGATAAGAC
CACATGAGATCACCTTGTCTTATAATACTCCAGTGCTTAGAGGCCTCTAA
CCTCTTGGGGTAGGCTCCGANATCTAGNTCATCAGAAAAATATGCTCAAN
AAACAGTACAAGTTGACAGAAGTTATTGAAAGCCTGTGGCTGGTTAAGAA
AAACAAGATCAGAGAAGTGATCTTTGAAAGCACTGTGCTCATTCACCCCG
CTTACCATATTTAGGCTCACAAGAACATATGCTCTCAGAAGGACAGAAAT
GCGAAAACCCAGGAGAAGGCAAGACACAGTGTCTACAGAATTTGTTTTCA
AGCACATCTCCTGGTTTCTTATCTCCTGGTAAATGATCCAGGATACAAGA
ATAAATTTGTCATGTATATGAGGAAAAAGGAGATTACAGCCTGCAG

Query= MSMg01no162_m23.b1 MSMg01no162_m23.b1 CHROMAT_FILE:
MSMg01no162_m23.b1 PHD_FILE: MSMg01no162_m23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:16 2005
         (239 letters)



>mm_chr12_40932656_40933294
          Length = 639

 Score =  443 bits (229), Expect = e-129
 Identities = 235/237 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   gatctgtgggaggactgggtgctaaaaatccaaaataacaagaccttggctcttagaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 437 gatctgtgggaggactgggtgctaaaaatccaaaataacaagaccttggctcttacaaag 378

                                                                       
Query: 61  gccacatggcagtcattgatttcagagcctcttgggttagtctgcttggttgagatgaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gccacatggcagtcattgatttcagagcctcttgggttagtctgcttggttgagatgaga 318

                                                                       
Query: 121 tttatttaggatggatgaggagggcagtctcttgaagtttaagacctaactgcttttggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tttatttaggatggatgaggagggcagtctcttgaagtttaagacctaactgcttttggt 258

                                                                    
Query: 181 tggttggtaagaagagtttaattttcttggggtaaaactgtggggctgttgttttta 237
           |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 257 tggttggtaagaagagtttatttttcttggggtaaaactgtggggctgttgttttta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space:   144900
Effective search space used:   144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no162_m23.g1 MSMg01no162_m23.g1 CHROMAT_FILE:
MSMg01no162_m23.g1 PHD_FILE: MSMg01no162_m23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:16 2005
         (251 letters)



>mm_chr12_40798175_40798825
          Length = 651

 Score =  470 bits (243), Expect = e-137
 Identities = 249/251 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagaaaaacaagatcagagaagtgatctttgaaagcactgtgctcattcaccccgcttac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagaaaaacaagatcagagaagtgatctttgaaagcactgtgctcattcaccccgcttac 260

                                                                       
Query: 61  catatttaggctcacaagaacatatgctctcagaaggacagaaatgcgaaaacccaggag 120
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 catatttaggctcacaagaacatatgctctcagaaggacagaaatgtgaaaacccaggag 320

                                                                       
Query: 121 aaggcaagacacagtgtctacagaatttgttttcaagcacatctcctggtttcttatctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 aaggcaagacacagtgtctacagaatttgttttcaagcacatctcctggtttcatatctc 380

                                                                       
Query: 181 ctggtaaatgatccaggatacaagaataaatttgtcatgtatatgaggaaaaaggagatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggtaaatgatccaggatacaagaataaatttgtcatgtatatgaggaaaaaggagatt 440

                      
Query: 241 acagcctgcag 251
           |||||||||||
Sbjct: 441 acagcctgcag 451


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space:   155364
Effective search space used:   155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)