Query= MSMg01no163_j15.b1 MSMg01no163_j15.b1 CHROMAT_FILE:
MSMg01no163_j15.b1 PHD_FILE: MSMg01no163_j15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:13 2005
(344 letters)
>mm_chr12_5412137_5412880
Length = 744
Score = 642 bits (332), Expect = 0.0
Identities = 341/344 (99%)
Strand = Plus / Plus
Query: 1 atggtcatttagtcacctttgagcttgtttcctatagctccagacctgattggctaaggc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 atggtcatttagtcacctttgagcttgtttcctatagctccagacctggttggctaaggc 260
Query: 61 atatacccttcctacatgttcacagaaggccttgcagccaaacaccaagtccacagacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atatacccttcctacatgttcacagaaggccttgcagccaaacaccaagtccacagacca 320
Query: 121 cctttctagccccagtttctttataggcccaacccacttaacatagaaatggctgcccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctttctagccccagtttctttataggcccaacccacttaacatagaaatggctgcccaa 380
Query: 181 aatttgtgcttttgagtatgccagagtagaattttgatatatgttgaaggtttcacattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatttgtgcttttgagtatgccagagtagaattttgatatatgttgaaggtttcacattt 440
Query: 241 attatcttaatttctggtgtctctttgcttacatccaaacaaaaatattcagaaagtatc 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 441 attatcttaatttctggtgtctctttgcttatatccaaacaaaaatattcagaaagtgtc 500
Query: 301 ctctttaaataacaagtttttgctcattctgggtcaagccttca 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctctttaaataacaagtttttgctcattctgggtcaagccttca 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no163_j15.g1 MSMg01no163_j15.g1 CHROMAT_FILE:
MSMg01no163_j15.g1 PHD_FILE: MSMg01no163_j15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:13 2005
(158 letters)
>mm_chr12_5572078_5572635
Length = 558
Score = 279 bits (144), Expect = 8e-80
Identities = 153/156 (98%)
Strand = Plus / Minus
Query: 1 ctgggtctgttaagcacattcatgctccagtttctaatctatgcctttgatttgcacaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ctgggtctgttaagcacattcatgctccagtttctaatctatgcctttgatttgcacaac 297
Query: 61 ttgaacatactgtcatcattttaaaggagaagagcgacgaggaaatgagaactaagagca 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 296 ttgaacatactgtcatcattttaaaggagaagagcgaagaggaaatgagaactaagagca 237
Query: 121 gagggagcggtagggaggggaggtgggaggagattg 156
|||||||| |||||||||||||| ||||||||||||
Sbjct: 236 gagggagcagtagggaggggaggagggaggagattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 158
Length of database: 558
Length adjustment: 8
Effective length of query: 150
Effective length of database: 550
Effective search space: 82500
Effective search space used: 82500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
