Query= MSMg01no166_o02.b1 MSMg01no166_o02.b1 CHROMAT_FILE:
MSMg01no166_o02.b1 PHD_FILE: MSMg01no166_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:30 2005
(615 letters)
>mm_chr12_85785392_85786406
Length = 1015
Score = 739 bits (382), Expect = 0.0
Identities = 388/390 (99%)
Strand = Plus / Plus
Query: 226 aaaaagtgagtcccaggtcagccagagctatttatgagaccctgtttcataaaaagggtt 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aaaaagtgagtcccaggtcagccagagctatttatgagaccctgtttcataaaaagggtt 485
Query: 286 ggggtggataggtcaccacaaactcaaggctagtctgggagtctacacagtgaaggcccc 345
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 486 ggggtggataggtcaccacaaactcaaggctagcctgggagtctacacagtgaaggcccc 545
Query: 346 agacacagaaagttatagaaacgataaatcatgaagatcaagtcctagctttccaaggaa 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 agacacagaaagttatagaaacgataaatcatgaagatcaagtcctagctttccaaggaa 605
Query: 406 gtcttaatttaaggaaccttttgtatcatattttgcaaaaaacagtcactacaaatctaa 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gtcttaatttaaggaaccttttgtatcatattttgcaaaaaacagtcactacaaatctaa 665
Query: 466 aagtacttagtataatatctaaagaaagtgttgaagacagtataaatcaatataaatata 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 aagtacttagtataatatctaaagaaagtgttgaagacagtataaatcaatataaatata 725
Query: 526 ataaaccataaataacattgtctctattcaatgtaactacagattaaatagcaataaaat 585
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 726 ataaaccataaataacattgtctctactcaatgtaactacagattaaatagcaataaaat 785
Query: 586 acaagtatatgctcacacatacttgaatac 615
||||||||||||||||||||||||||||||
Sbjct: 786 acaagtatatgctcacacatacttgaatac 815
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space: 608025
Effective search space used: 608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_o02.g1 MSMg01no166_o02.g1 CHROMAT_FILE:
MSMg01no166_o02.g1 PHD_FILE: MSMg01no166_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:30 2005
(576 letters)
>mm_chr12_85914606_85915581
Length = 976
Score = 930 bits (481), Expect = 0.0
Identities = 539/565 (95%), Gaps = 12/565 (2%)
Strand = Plus / Minus
Query: 12 gtaggagtgatgcctttaattccagtacagaggtagaagcaggcagatgtctatgagata 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976 gtaggagtgatgcctttaattccagtacagaggtagaagcaggcagatgtctatgagata 917
Query: 72 aaagccagcctggtgtatgtcaggccagccaggactagacagtgagaccctgactcaaaa 131
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 gaagccagcctggtgtatgtcaggccagccaggactagacagtgagaccctgactcaaaa 857
Query: 132 caaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa 191
|| ||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 856 ca-----------aaacaaagaaa-aaagaaagaaagaaagaaagaaagaaagaaagaaa 809
Query: 192 gaaagaaagaaagaaagaaaggaaggaagaaattatttgggattttttaacatctgtagc 251
| ||| ||| ||| ||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 808 ggaaggaaggaaggaaggaaggaaggaagaaattatttgggatttttgaacatctgtagc 749
Query: 252 cctctgtttctctcctgccacttgctgaaatttttttgagcagatcatcaaaatatgcaa 311
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 748 cctctgtttctctcctgccacttgctgaaaattttttgagcagatcatcaaaatatgcaa 689
Query: 312 gtcccttttaaaaccagggaaactggggaaagcaggtagtgaggaaagcccaagaaggga 371
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 688 gtcccttttaaaaccagggaaactggggaaagcagctagtgaggaaagcccaagaaggga 629
Query: 372 gctggcttttagagttattcaagagccttcctgtacttggaaagagtcccattcaagaaa 431
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gctggcttttagagttactcaagagccttcctgtacttggaaagagtcccattcaagaaa 569
Query: 432 caaacaagagtcaggtgtggtggggactggcctgtgccacactgcacaggagtgggggat 491
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 568 caaacaagagtcaggtgtggtggggactggcctgtgccacactgcacaggagagggggat 509
Query: 492 tatgatcaggccaagttcaaggccagctcgatcaccataggtcaggccagccggaaatac 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tatgatcaggccaagttcaaggccagctcgatcaccataggtcaggccagccggaaatac 449
Query: 552 actacgagaagaagataaaaaacaa 576
||| ||||||||| |||||||||||
Sbjct: 448 acttcgagaagaaaataaaaaacaa 424
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
