Query= MSMg01no166_o15.b1 MSMg01no166_o15.b1 CHROMAT_FILE:
MSMg01no166_o15.b1 PHD_FILE: MSMg01no166_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:33 2005
(365 letters)
>mm_chr12_51289878_51290642
Length = 765
Score = 667 bits (345), Expect = 0.0
Identities = 357/361 (98%)
Strand = Plus / Minus
Query: 5 gaattcatttactatccttcacttttgtgtttgctaacatctttttaaaatgtttcactt 64
||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaattcattcacaatgcttcacttttgtgtttgctaacatctttttaaaatgtttcactt 506
Query: 65 ttgctaggatcataatagttcacttgtggatggttcaagtagcctgatatgttaaatatg 124
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgctaggatcataatagtttacttgtggatggttcaagtagcctgatatgttaaatatg 446
Query: 125 gtttgattaattttcagttatttagactggtaaattcagaaaattcacttaaaaataagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtttgattaattttcagttatttagactggtaaattcagaaaattcacttaaaaataagt 386
Query: 185 ttttttttcagttgacataactcattaacttgtaaaggtgaagtcagcatattttactac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttttttttcagttgacataactcattaacttgtaaaggtgaagtcagcatattttactac 326
Query: 245 atttgatcatatatatttaagatatttgccttgtcccctgaaatgtctactcattgagtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atttgatcatatatatttaagatatttgccttgtcccctgaaatgtctactcattgagtt 266
Query: 305 aaaggggaaatagagaaacaaacatgaaacaccaaaggtgcaagaaaccccaaaaggatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaggggaaatagagaaacaaacatgaaacaccaaaggtgcaagaaaccccaaaaggatt 206
Query: 365 a 365
|
Sbjct: 205 a 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_o15.g1 MSMg01no166_o15.g1 CHROMAT_FILE:
MSMg01no166_o15.g1 PHD_FILE: MSMg01no166_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:33 2005
(337 letters)
>mm_chr12_51150802_51151537
Length = 736
Score = 574 bits (297), Expect = e-168
Identities = 327/337 (97%), Gaps = 3/337 (0%)
Strand = Plus / Plus
Query: 1 cagagccatagaaagatgccttttgaaatgtgttcataatgtagaacctgagtagcaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagagccatagaaagatgccttttgaaatgtgttcataatgtagaacctgagtagcaaac 260
Query: 61 tttatgtcctgtaaagtgcactttgaaaaaggaaagaaacacacatatgcctttagttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttatgtcctgtaaagtgcactttgaaaaaggaaagaaacacacatatgcctttagttgt 320
Query: 121 tgttgttgattacaaataaata-taaaaccaaaagtttgttacaggaaaaaaaaatactg 179
||||||||||||||| ||| || ||||||||||||||||||||||||||||||| |||||
Sbjct: 321 tgttgttgattacaagtaa-taataaaaccaaaagtttgttacaggaaaaaaaa-tactg 378
Query: 180 tctgttctaatgttctgaagtctctacttcttctattaatttgagtttgaatcttacact 239
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tctgttccaatgttctgaagcctctacttcttctattaatttgagtttgaatcttacact 438
Query: 240 taaatttttaacttgttggttgattctgtaactagcaagaagcaggtatcttgtttcatt 299
||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 439 taagttttaaacttgttggttgattctgtaactagcaagaagcaggtgttttgtttcatt 498
Query: 300 ctttcagatgtggacatcctgtttgcacagaattatc 336
|||||||||||||||||||||||||||||||||||||
Sbjct: 499 ctttcagatgtggacatcctgtttgcacagaattatc 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 736
Length adjustment: 9
Effective length of query: 328
Effective length of database: 727
Effective search space: 238456
Effective search space used: 238456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
