Query= MSMg01no174_f11.b1 MSMg01no174_f11.b1 CHROMAT_FILE:
MSMg01no174_f11.b1 PHD_FILE: MSMg01no174_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:11 2005
(314 letters)
>mm_chr12_43795341_43796053
Length = 713
Score = 458 bits (237), Expect = e-133
Identities = 281/311 (90%), Gaps = 27/311 (8%)
Strand = Plus / Minus
Query: 5 gaattcatacagggattcttagagggaagttttgcaaggggtcataggcatgaactgaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gaattcatacagggattcttagagggaagttttgcaaggggtcataggcatgaactgaaa 597
Query: 65 ctcatcatgtttaccttggttacagatactactgagaactgcatacaccaacagtagaag 124
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ctcatcatgtttaacttggttacagatactactgagaactgcatacaccaacagtagaag 537
Query: 125 ctaatatcaaatgccaaatatgatagcttttgcaagaggaaattagtcagctatttgctg 184
|||||||||||||||||||||| | |||||||||||||
Sbjct: 536 ctaatatcaaatgccaaatatg----c--------------------cagctatttgctg 501
Query: 185 gcaagttgagaacattaaatcatttcaagtatacaaagaaaaacacttcagttttaatga 244
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 500 gcaagttgagaacattaaatcatttcaagtatacaaagaaa--cacttcagttttaatga 443
Query: 245 tagacaaacttcctgggctttttcctgtgcaaaa-tatttttgcctcacactaccattta 303
||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 442 tagacaaactttctgggctttttactgtgcaaaaatatttttgcctcacactaccattta 383
Query: 304 tatattcacta 314
|||||||||||
Sbjct: 382 tatattcacta 372
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 713
Length adjustment: 9
Effective length of query: 305
Effective length of database: 704
Effective search space: 214720
Effective search space used: 214720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_f11.g1 MSMg01no174_f11.g1 CHROMAT_FILE:
MSMg01no174_f11.g1 PHD_FILE: MSMg01no174_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:11 2005
(156 letters)
>mm_chr12_43620993_43621548
Length = 556
Score = 282 bits (146), Expect = 5e-81
Identities = 152/154 (98%)
Strand = Plus / Plus
Query: 1 catgaatagtgaaggctgttgtgtttttatgatgatacttttctcctggtctgtgtcctc 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 catgaatagtgaaggctgttgtgtttttatgatgatactcatctcctggtctgtgtcctc 260
Query: 61 acaaggtagaatggatagaggaagaacagtgcctagctatattacttcataactttggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaggtagaatggatagaggaagaacagtgcctagctatattacttcataactttggaa 320
Query: 121 gatattgaacttatccattagataaatacaattt 154
||||||||||||||||||||||||||||||||||
Sbjct: 321 gatattgaacttatccattagataaatacaattt 354
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 556
Length adjustment: 8
Effective length of query: 148
Effective length of database: 548
Effective search space: 81104
Effective search space used: 81104
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
