TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCGGCCTGGAGTTGATGGAGGGAAAGCGGAGCCCAGCTCGCGGGAGG
GGTGGGGAAGGCTGGGGCCTAGGCTGGCAAAGCTTGTGGAGCTGGAGGAG
GAGGAGGAGGAGGAGGAGGACGATTCTTTTTTTTTTTCCTTCTTTCTTTA
ATTCACCTTCCCCTTTTTTCCCTCCCCATTACTCCCCTTACTCTTTCCTT
CTTTTTTTTTTTTTCCAACTCTTTTCCCTCCCATTCTTTCCTCCTCTTTT
TTTTTCGCACTCCTTTTTTCCCCCCTTTTTTTTTCTCCCCCACTTTTTCT
CCCTCTCTTCTCCTCACCTTTTTAGTAATTTTCTCAGGAACAGGGCCCCT
CTTTTTTTTTTTATTTTTTCCCCCTCTTCCTTCTCCCCCCCCCTTATTAA
AAACACTTCTCTTTTCTTTCCTTCCCCCCCCCCCCCCTTTTCTCCCTTTC
CCCTTCTCCTTTTCCCCTTTTCCCCCCTTTTTTACCCCTTCCCCCCCTTT
TTTCCCCCCCCTTTTTCTTCCCTCCCCTTTCCTTTTTCCCCCCTTCTTAT
TTTCCCCCCCTTATCTCTCTCTTTTTCCCCCCTTTTTACCCTATTTCCAT
TCCTTCTCTTCCCTTCCCCTCCCCTTTTTTTCTCTTCTTTTACCCTTTTT
TCCTTATTCTCCCCTTATTTTGTTCTTCTCCCCCCCCCCTCTCTTCTTTC
TTCTCCTTATCTTTCCTCCTCCCCTCTCTCTCCCTTCTCTCCCCCTCCCT
CTCTTTTTTTTCCCCACTCTCCTCTCACCCCCTCTTTTTCCCTTTTTCTT
TCACACCCT

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTGCCACTGTTCTGTCACCAAAGACAA
AAGCAGTAGCTGGTTTTAAACCAAATACATACACATATACAAATATTGAC
TGAATTAACTAACCAAAGAATAAAAGAAGTAAGGCTACCCAATAAAAAGT
ATGCACCAAGATAAAACAATTTCCAAAAGAATGGGAATAGTTAATGTTAA
ATTATTAAAAGGGACTAAGTATGGTAACAAATATAAGATACCCATAATGT
TTGACAATTGAGAAATCAGTAATATTGAAGAAAACAAGTGTTGGCAGAGT
TGTGAAAAGATGAATAAGAAAGATGGCAGGAGGAAAGGAAAGGAGAACAG
AGAGTGCAGTTACTACTTTTTCTGTGATGTGACTGCAGTACTGTCGTCTA
CTGAGTTAACAGGGTCTACAAGCAAATGTTATTAAATAAATAAGCTGAGT
GACCCCTCCCCCAAAAACTCAATTAGAAGTAAACCAGTCTACCTTTCATT
CAAACAAACTTTCCTACCATGTAGGAAAGTTATCATGTTTTACATGTAGA
AAACTTCAAAACACTCACCAATTCCTTGTTGTGATGAAGAAGGATTTAGA
TTTACTGCAGAGTAATGTTCATTAAACTGGAAAATAATTTCCATTAACTA
TTATTTGTGAAATCAAAAGAATAGTTTATATAGCATTA

Query= MSMg01no174_f17.g1 MSMg01no174_f17.g1 CHROMAT_FILE:
MSMg01no174_f17.g1 PHD_FILE: MSMg01no174_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:12 2005
         (614 letters)



>mm_chr12_73985518_73986529
          Length = 1012

 Score = 1106 bits (572), Expect = 0.0
 Identities = 603/614 (98%), Gaps = 2/614 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atacatacacatatacaaatattgactgaattaactaaccaaagaataaaagaagtaagg 60
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 atacatacacatatacaaatattgactgaattaactaaacaaagaataaaagaagtaagg 260

                                                                       
Query: 61  ctacccaataaaaagtatgcaccaagataaaacaatttccaaaagaatgggaatagttaa 120
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctacccaataaaaagtacgcaccaagataaaacaatttccaaaagaatgggaatagttaa 320

                                                                       
Query: 121 tgttaaattattaaaagggactaagtatggtaacaaatataagatacccataatgtttga 180
           |||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 321 tgttaaattattaaaaaggactaagtatggtaacaaatataagatacccataacatttga 380

                                                                       
Query: 181 caattgagaaatcagtaatattgaagaaaacaagtgttggcagagttgtgaaaagatgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caattgagaaatcagtaatattgaagaaaacaagtgttggcagagttgtgaaaagatgaa 440

                                                                       
Query: 241 taagaaagatggcaggaggaaaggaaaggagaacagagagtgcagttactactttttctg 300
            ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||
Sbjct: 441 gaagaaagatggcaggaggaaaggaaaggagaacagaga--gcagttactactttttctg 498

                                                                       
Query: 301 tgatgtgactgcagtactgtcgtctactgagttaacagggtctacaagcaaatgttatta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgatgtgactgcagtactgtcgtctactgagttaacagggtctacaagcaaatgttatta 558

                                                                       
Query: 361 aataaataagctgagtgacccctcccccaaaaactcaattagaagtaaaccagtctacct 420
           ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 559 aataaataagctgggtgacccctcctccaaaaactcaattagaagtaaaccagtctacct 618

                                                                       
Query: 421 ttcattcaaacaaactttcctaccatgtaggaaagttatcatgttttacatgtagaaaac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ttcattcaaacaaactttcctaccatgtaggaaagttatcatgttttacatgtagaaaac 678

                                                                       
Query: 481 ttcaaaacactcaccaattccttgttgtgatgaagaaggatttagatttactgcagagta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 679 ttcaaaacactcaccaattccttgttgtgatgaagaaggatttagatttaccgcagagta 738

                                                                       
Query: 541 atgttcattaaactggaaaataatttccattaactattatttgtgaaatcaaaagaatag 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 atgttcattaaactggaaaataatttccattaactattatttgtgaaatcaaaagaatag 798

                         
Query: 601 tttatatagcatta 614
           ||||||||||||||
Sbjct: 799 tttatatagcatta 812


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1012
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1002
Effective search space:   605208
Effective search space used:   605208
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)