Query= MSMg01no177_m16.b1 MSMg01no177_m16.b1 CHROMAT_FILE:
MSMg01no177_m16.b1 PHD_FILE: MSMg01no177_m16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:25 2005
(272 letters)
>mm_chr12_12811022_12811693
Length = 672
Score = 447 bits (231), Expect = e-130
Identities = 244/249 (97%), Gaps = 2/249 (0%)
Strand = Plus / Plus
Query: 7 attcaggcatgagttattgtgccccctgcacaaacccaaattgtggttcagctcagccta 66
||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 207 attcaggcatgagttattgtgccttctacacaaacccaaattgtggttcagctcagccta 266
Query: 67 atgagtgatgggtaatggtggaggccaaggtttcaaattatgagaaaggtcttaccttga 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atgagtgatgggtaatggtggaggccaaggtttcaaattatgagaaaggtcttaccttga 326
Query: 127 ggtcagtttgccctgaccctcagatgttagccagagctctctggagaagcaatatcaata 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ggtcagtttgccctgaccctcagatgttagccagagctctctggagaagcaatatcaata 386
Query: 187 agaaaaataagtaaataggtaggtaaagagatagataatgatagatagatagatagatag 246
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 387 agaaaaataagtaaataggtaggtaaagagatagata--gatagatagatagatagatag 444
Query: 247 atagataga 255
|||||||||
Sbjct: 445 atagataga 453
Score = 83.9 bits (43), Expect = 1e-20
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 226 gatagatagatagatagatagatagatagatagatagatagat 268
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gatagatagatagatagatagatagatagatagatagatagat 672
Score = 78.1 bits (40), Expect = 6e-19
Identities = 44/46 (95%), Gaps = 2/46 (4%)
Strand = Plus / Plus
Query: 215 agatagataatgatagatagatagatagatagatagatagatagat 260
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 629 agatagata--gatagatagatagatagatagatagatagatagat 672
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 69
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 3
Length of query: 272
Length of database: 672
Length adjustment: 9
Effective length of query: 263
Effective length of database: 663
Effective search space: 174369
Effective search space used: 174369
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no177_m16.g1 MSMg01no177_m16.g1 CHROMAT_FILE:
MSMg01no177_m16.g1 PHD_FILE: MSMg01no177_m16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:25 2005
(425 letters)
>mm_chr12_12952364_12953188
Length = 825
Score = 783 bits (405), Expect = 0.0
Identities = 420/425 (98%)
Strand = Plus / Minus
Query: 1 tttctacttttgggacagaagcagcagtggtgtacgaaagtgttcatatctctcactctc 60
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 625 tttctacttttgggacagaagcagcagtggtgtatgaaagtgttcgtatctctcactctc 566
Query: 61 cagcctcaccaccgttttgaggcaatctgctagactgaattgttaatctccctgagattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cagcctcaccaccgttttgaggcaatctgctagactgaattgttaatctccctgagattt 506
Query: 121 aatttggattgtcccgagtcaggcgaagtagcccattttcttgttggtactcaatttgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aatttggattgtcccgagtcaggcgaagtagcccattttcttgttggtactcaatttgca 446
Query: 181 tttcctgtttggcaaattgcctattcatatcctagagccagattcctctctggcttttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttcctgtttggcaaattgcctattcatatcctagagccagattcctctctggcttttct 386
Query: 241 ttacctccattcagtttctaggatcccttcctgcacgaggaatataacctttgcctctga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttacctccattcagtttctaggatcccttcctgcacgaggaatataacctttgcctctga 326
Query: 301 gggccctcaggaagtgccatcccaaatatgacatctctgagagctgatgaactcaagggg 360
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 325 gggccctcaggaagtgccatcccaaatatgacatttttgagagctgatgaactcaagggg 266
Query: 361 cgacggagctggaaactgcaagtgtaggcttatctgtaccccttatctacataaagacat 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 cgacggagctggaaactgcaagtgtaggcttagctgtaccccttatctacataaagacat 206
Query: 421 cctcc 425
|||||
Sbjct: 205 cctcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
