Query= MSMg01no178_d22.b1 MSMg01no178_d22.b1 CHROMAT_FILE:
MSMg01no178_d22.b1 PHD_FILE: MSMg01no178_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:59 2005
(527 letters)
>mm_chr12_38419355_38420281
Length = 927
Score = 895 bits (463), Expect = 0.0
Identities = 507/525 (96%), Gaps = 8/525 (1%)
Strand = Plus / Minus
Query: 4 ggaattcttcatgtgtaactccaagcagaggtctgacctcccttgcagaaggattagttg 63
||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 841 ggaattcttcatgtgaaaatccaagcacaggtctgacctcccttgcagaaggattagttg 782
Query: 64 ttaaatgattgccaagctcttggaatatatgaagctctccaaaaaaaaaaaaaaaaaaaa 123
|||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 781 ttaaatgattgccaagctcttggaatatatgaagctctcc------gaaaaaaaaaaaaa 728
Query: 124 ggttggttgctaattctcctcattctgagaaggggaagctgatgacagcgctaggctgaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ggttggttgctaattctcctcattctgagaaggggaagctgatgacagcgctaggctgaa 668
Query: 184 gtgtctcatctcagacaaatactcagcccatattcactgtggaatttccaatttgcaagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gtgtctcatctcagacaaatactcagcccatattcactgtggaatttccaatttgcaagt 608
Query: 244 ggccagagggcacattgaaaccttcatggagaaacagcccatactgcacctggcatagga 303
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 607 ggccagagggcacattgaaaccttcatggagaaacagcccataccgcacctggcatagga 548
Query: 304 ttagaggctctgtaaggaaaatgttatttcctgcgttcagttctgaatttggttcctttt 363
|||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 547 ttagaggctccgtaaggaaaatgttatttcctgtgttcagttctcaatttggttcctttt 488
Query: 364 tttttttt-cacattctctcatctgactagttaagtgggttttgcatagcaatcatcctg 422
|||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 487 tttttttttcacattctctcatctgactagttaagtgggttttgcatag-aatcatcctg 429
Query: 423 acataggtaagaagatcaaatgctgaaagacaatattacctgagaaaaacccattagaat 482
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tcataggtaagaagatcaaatgctgaaagacaatattacctgagaaaaacccattagaat 369
Query: 483 gagattatggaaataaataggcatctttagtggttaagtaaggtc 527
||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 368 gagattatggaaataaataggcatctttagtggtttagtaaggtc 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no178_d22.g1 MSMg01no178_d22.g1 CHROMAT_FILE:
MSMg01no178_d22.g1 PHD_FILE: MSMg01no178_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:00 2005
(243 letters)
>mm_chr12_38241776_38242418
Length = 643
Score = 379 bits (196), Expect = e-110
Identities = 208/212 (98%)
Strand = Plus / Plus
Query: 32 gcatgcacattttcaattaccatgaatgaccatacaaatgtagtggtttgtagaaggctg 91
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 232 gcatgcacattttcaattaaaatgaatgaccatacaaatgtagtggtttgtagaaggctg 291
Query: 92 gcattaactaactatccctagttaatgtctgccttctacaaacctctccatttgtagttc 151
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 292 acattaactaactatccctagttaatgtcggccttctacaaacctctccatttgtagttc 351
Query: 152 agaacatggttgatgatttctaatcctcaactgaacctccatgtgcatgcttaaaaatat 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 agaacatggttgatgatttctaatcctcaactgaacctccatgtgcatgcttaaaaatat 411
Query: 212 aaaaacatatgcagctagagcaacgagtacca 243
||||||||||||||||||||||||||||||||
Sbjct: 412 aaaaacatatgcagctagagcaacgagtacca 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
