TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACCTGATTACCACCGAATGGCAGAGAAGCACCTGAAAAAATGTT
CAACATCCTTAATCATCAGGGAAATGCAAATCAACACAACCCTGAGATTC
TACCTCACATCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAG
ATGCTGGCAAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGG
ATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTCAGA
AAATTGGACATAGTACTACCGGAGGATCCCGCAATACCTCTCCTGGGCAT
ATATCCAGAAGATGTCCCAACCAGTAAGAAGAACACATGCTCCACTATGT
TCATAGCAGCCTTGTTCACAATAGCCAGAAGCTGGAAAGAACTTAGATGC
CCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGA
ATACTACTCAGCTATTTAAAAAAATGAATTTATGAAATTCCTAGGCAAAT
GGATGGACCTGGAGGGTATCATCCTGAGTGAAGTAACCCAATCACAAAGG
AACTCGCACAATATGTACTCACTGATAAGTGGATAATAGCCCAGAAACTT
AGGATACCCAAGATATAAGATACAACTTGCCAAACGCATGANATTCAAGA
AGAACGAAGACCAAAGTGTGGACACTTTACCCTTTCTTAG

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAAGACATTTTCTTTCTTGAAACA
TATGGGGCTTTTAAGGGAGGTAAAGGAAGAGTTGAGTGATTATTTTTACT
CCACTCATTGCTGTAGACATTGAGAATGCTAGACACTGCCAAATGTTATC
ATCATTTAAAGGAGATGGTTAGATATAACAGAATTGGTTAGGATGCTTTC
AGCCCCAACTCATAGACATTAACACTGAAAAATATTTGGCTAAATATTTG
AAGTATTTACTACTAATGTGTCTAGAGGTGGTGGGCGGTGCCAGTTAAGT
GACTATAGAACCTCACCCAGTTTCTTTTGCTGTTGTCTTTTGACATTATG
TGTTAGATTTGCCCCCCCTATGGTTGCAAGTGACAATACTCAGAGAAAGC
CATGACTATCTTTTTCTTGACAATTACTTTCCCTATATCTCTTAATGCTA
ATAAATCATTGGCTAGAATTGTGTTGTGTAGCCAAGCTTAGCCAACCAGG
AATTAGTATGAGGGATTAGTCATGGGATCAGTCATACCCCAACTCCTAGG
AAGCACTTGACTCCCTAAGGGAAGTTGGCTATCTGAAGAACATTAGAATT
CTGAGAACGGAAATGGAGATAATGTGGATCTGGGATGGATCATCATCAAT
AT

Query= MSMg01no182_e21.g1 MSMg01no182_e21.g1 CHROMAT_FILE:
MSMg01no182_e21.g1 PHD_FILE: MSMg01no182_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:01 2005
         (564 letters)



>mm_chr12_40957762_40958725
          Length = 964

 Score =  919 bits (475), Expect = 0.0
 Identities = 551/599 (91%), Gaps = 39/599 (6%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagacattttctttcttgaaacatatggggcttttaagggaggtaaaggaagagttgagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aagacattttctttcttgaaacatatggggcttttaagggaggtaaaggaagagttgagt 555

                                                                       
Query: 61  gattatttttactccactcattgctgtagacattgagaatgctagacactgccaaatgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gattatttttactccactcattgctgtagacattgagaatgctagacactgccaaatgtt 495

                                                                       
Query: 121 atcatcatttaaaggagatggttagatataacagaattggttaggatgctttcagcccca 180
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 494 atcatcatttaaaggagatggttagatataacagaattggttaggatgttttcagcccca 435

                                                                       
Query: 181 actcatagacattaacactgaaaaatatttggctaaatatttgaagtatttactactaat 240
           | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 434 agtcatagacattaacactgaaaaatatttggctaaatagttgaagtatttactactaat 375

                                                                       
Query: 241 gtgtctagaggtggtgggcggtgccagttaagtgactatagaacctcacccagtttcttt 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 374 gtgtctagaggtgttgggcggtgccagttaagtgactatagaacctcacccaggttcttt 315

                                                                       
Query: 301 tgctgttgtcttttgacattatgtgttagatttgccccc----cctatggttgcaagtga 356
           ||||||||||||||||||||||||||||||||||    |    |||||||||||||||||
Sbjct: 314 tgctgttgtcttttgacattatgtgttagatttg----cttgtcctatggttgcaagtga 259

                                                                       
Query: 357 caatactcagagaaagccatgactatctttttcttgacaattactttccctatatctc-- 414
           |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||  
Sbjct: 258 caatactcagagaaagacatgactatctttttcttgacaattactttccctatgtctcat 199

                                                                       
Query: 415 ------tt------aat-----------------gctaataaatcattggctagaattgt 445
                 ||      |||                 ||||||||| ||||||||||||||||
Sbjct: 198 aaaccattggctagaattgtgttgtgtagccaacgctaataaaccattggctagaattgt 139

                                                                       
Query: 446 gttgtgtagccaagcttagccaaccaggaattagtatgagggattagtcatgggatcagt 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gttgtgtagccaagcttagccaaccaggaattagtatgagggattagtcatgggatcagt 79

                                                                      
Query: 506 cataccccaactcctaggaagcacttgactccctaagggaagttggctatctgaagaac 564
           ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78  cataccctaactcctaggaagcacttgactccctaagggaagttggctatctgaagaac 20


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space:   528516
Effective search space used:   528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)