Query= MSMg01no182_f20.b1 MSMg01no182_f20.b1 CHROMAT_FILE:
MSMg01no182_f20.b1 PHD_FILE: MSMg01no182_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:05 2005
(340 letters)
>mm_chr12_12144471_12145210
Length = 740
Score = 598 bits (309), Expect = e-175
Identities = 326/339 (96%), Gaps = 12/339 (3%)
Strand = Plus / Minus
Query: 1 tcagggatctgcctgtgaagtactgagattaaaggcacatagcaccatgcctggatttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tcagggatctgcctgtgaagtactgagattaaaggcacatagcaccatgcctggatttca 594
Query: 61 cacttacctttcaatatctcctacaacacccagttgcacacacacacacacacatacaca 120
||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 593 cacttacctttcaatatctcctacaacacccagttgcacacac------------acaca 546
Query: 121 cacacaatttcacggtattttgaacaccatttactcagcatgtataagtactgtttgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 cacacaatttcacggtattttgaacaccatttactcagcatgtataagtactgtttgatg 486
Query: 181 aagtagcatgatcttggtggagatgctttttgagaaaagcctgtcataaagtattggtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aagtagcatgatcttggtggagatgctttttgagaaaagcctgtcataaagtattggtgc 426
Query: 241 taaattatgcatgaagcagttatgcaaatatcaagaggcacctcagtaagaacctcacag 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 425 taaattatgcatgaagcagttatgcagatatcaagaggcacctcagtaagaacctcacag 366
Query: 301 agatcaagtgtccctttatgcctgactcattgatttaag 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 365 agatcaagtgtccctttatgcctgactcattgatttaag 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_f20.g1 MSMg01no182_f20.g1 CHROMAT_FILE:
MSMg01no182_f20.g1 PHD_FILE: MSMg01no182_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:05 2005
(316 letters)
>mm_chr12_12003522_12004239
Length = 718
Score = 565 bits (292), Expect = e-165
Identities = 308/314 (98%), Gaps = 2/314 (0%)
Strand = Plus / Plus
Query: 5 gaattcatctgatttaccaaacccaactctttcatgctagaggactgatcaatttttcta 64
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatctggtttaccaaacccaactttttcatgctagaggactgatcaatttttcta 264
Query: 65 aatcccccaaccaactaaagagttagaaaattccaatgtatttacttattacaaaaacta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatcccccaaccaactaaagagttagaaaattccaatgtatttacttattacaaaaacta 324
Query: 125 aacctcataagtaaggaaaattccactgagttttcagttattgatggtgagcctcaaaat 184
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 325 aacctcataagtaaggaaaattccactgagttttcagttattaatggtgaacctcaaaat 384
Query: 185 tttgacctggggttcctatgttctccttcctcagaaaaaaaa--tgaagtatttattttc 242
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 385 tttgacctggggttcctatgttctccttcctcagaaaaaaaaaatgaagtatttattttc 444
Query: 243 tttaaagatttgtgtatccttctgcttaaggtggctttcaatgaagcctgtagttattgt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttaaagatttgtgtatccttctgcttaaggtggctttcaatgaagcctgtagttattgt 504
Query: 303 gccatcataccttc 316
||||||||||||||
Sbjct: 505 gccatcataccttc 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 718
Length adjustment: 9
Effective length of query: 307
Effective length of database: 709
Effective search space: 217663
Effective search space used: 217663
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
