TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCAATTTTCTCACCATTGCAGTAACTAACTACAGCTGGCAAAGCTA
TTCATCTGCTAGAGCAAGAGGCAAACTCCTAGTCAGCTGCTGCAAAGCAG
TCCCATATCCCCACACCTGGGATTAAAACAAAACTACACTCTGACAATAT
TTCTGTGTTTTAAAAAACAAAATCCCGGAATTTTCATTAGGTTTCTCTAT
TTTATCCTCTCATTTTTTTCCCTCATTTACCGGACAGAATTGTTTGGAGT
ACAAAGAAGGTCGAAATTTCAAATGCATACAGATTAACAATACGTATCAA
ATCTTTCCCAGCCCTTATTATAATCAAGTTTTTGTTAAAGAATTTTTTTT
GCAAGTCAAAAATTACCCCCCACATTTGCCATTCCCCTCAGTTTCCTCGC
TCTACATAATCAAAGGCAAAAGTGAAAGGTTTGTTTCTGAATGTGCAATA
CATTGAAAAATGAATGACTGAACAACAAATAATTAAGCAAATAAATAATA
AAAACAAGAAACAGTTCATTGTTAGGTGCTGCTCAGACACATTATTTTCT
CTTGCCCACTGTCATCAAGATGGATTGAATTCTGCTGCCACTTCAAAAGA
GTACCGATTTCGATTATATGCGCGCCTAATACAATTGTCTGCCACTTTTT
CCATTTCATCATGTATGGTCTATTACTCCGC

CATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCTG
AGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAA
ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGTCTAAGAT
CAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAA
CACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAA
TCAGTCTGGCAGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCC
AGCAATACCTCTCCTGGGCATATGTCCAGAAGACGCCCCAACTGGTAAGA
AGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGA
ATCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAAT
GTGGTACATCTACACGATGGAGTACTACTCAGCTATTAAAAAGAATGAAT
AGATGAAATTCCTAGCCAAATGGATGGACCTGGGGGGCATCATCCTGAGT
GAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAG
CGTATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAATTTCC
TAAACACATGAA

Query= MSMg01no182_i07.b1 MSMg01no182_i07.b1 CHROMAT_FILE:
MSMg01no182_i07.b1 PHD_FILE: MSMg01no182_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:17 2005
         (469 letters)



>mm_chr12_94337852_94338721
          Length = 870

 Score =  754 bits (390), Expect = 0.0
 Identities = 447/466 (95%), Gaps = 1/466 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaattttctcaccattgcagtaactaactacagctggcaaagctattcatctgc 64
           |||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 205 gaattccaattttcacacaattgcagtaactaactacagctggcaaaactattcatctgc 264

                                                                       
Query: 65  tagagcaagaggcaaactcctagtcagctgctgcaaagcagtcccatatccccacacctg 124
           |||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||
Sbjct: 265 tagagcaagaggcaaagtcatagtcagctgctgcaaagcagtcccatatccctacacctg 324

                                                                       
Query: 125 ggattaaaacaaaactacactctgacaatatttctgtgttttaaaaaacaaaatcccgga 184
           |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 325 ggattaaaacaaaattacactctgacaatatttctgtgttataaaaaacaaaatcccgga 384

                                                                       
Query: 185 attttcattaggtttctctattttatcctctcattttt-ttccctcatttaccggacaga 243
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 385 attttcattaggtttctctattttatcctctcatttttcttccctcatttaccggacaga 444

                                                                       
Query: 244 attgtttggagtacaaagaaggtcgaaatttcaaatgcatacagattaacaatacgtatc 303
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 445 attgtttggagtacaaagaaggtcgaaatttcaaatgcatacagtttaacaatacgtatc 504

                                                                       
Query: 304 aaatctttcccagcccttattataatcaagtttttgttaaagaattttttttgcaagtca 363
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acatctttcccagcccttattataatcaagtttttgttaaagaattttttttgcaagtca 564

                                                                       
Query: 364 aaaattaccccccacatttgccattcccctcagtttcctcgctctacataatcaaaggca 423
            ||||||   || | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taaattagtgcctagatttgccattcccctcagtttcctcgctctacataatcaaaggca 624

                                                         
Query: 424 aaagtgaaaggtttgtttctgaatgtgcaatacattgaaaaatgaa 469
           |||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 625 aaagtgaagggttcgtttctgaatgtgcaatacattgaaaaatgaa 670


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 870
Length adjustment: 10
Effective length of query: 459
Effective length of database: 860
Effective search space:   394740
Effective search space used:   394740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)