CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCCATTGCCTTTGGAAGCAATTGAGGGTTCACTGTAAAGAGAAGGA
AGCTGGGAGCATATGGAAGAATGTAACTAAGAGGGAGTATACATTAGATT
GCCAATTCCTGTGGTCCCTTTTCCCATCTCAGCCAGCCAGTGGCCAGGCC
TGGTTCCTGCCAGGAGACTAGAAAATTCTTCTCTGGGAGGACTGTTCAGC
CTGAATGAAGAACTCTACAGACCCTTTCTCCAGAGGTATCTACCAAAGTC
TCTTCATCACCCTATTACAAGGTCTGTCGCCACCAACTTCACCCACACAC
ACCTAGAGCTGGCTGGAATACCTCATGAACAACCAAGATAGGCATGACCT
CATGAATCCAAGACAAACAGCTTTTATTCACCAAGCTATGCGGACATATT
GTAGACAGCAAACATGAAGCTCTGGGACACCCGTCAACCCCAGGATAAAA
CTCGCACCCACAAAATAATCACTTAACAAAACAATGGCATTGAAATTGCC
TGCCTTTCCCCCACCCCCCTCACACACTGTTATAACTGCCAAGAGAAACA
ACTTGAAGGCGACATTCATGAAGGGTGGGAGATGAAAGCTGAGAACCACA
TGATGCCGGAAGGAAAGCAGGCTTTGTCTTCCCCATGGAATATACTCTTG
CTGGGCTTTGGCAAACCCATATGT

CATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCTGTTCTTGCAGCTACCCT
GGGAGTCTGGAATGGAGCCCAAAGAGAAAGTCCTAAAATCAAACAAACAA
AACCACCAGAATACGCAGAGCAATAAACATACTGCATCTATGCTCACTCC
TAAGACATTCAGAACAGCTGTGCATTTGCTCTGTGGACACAGCTTACCCA
TGTGGGTGAGGGTGCTCCCTGAGTGCATCCTGGCAGGGATAAGGGAACCT
TTGACCAGACTTCTAAGACTTACTGAAAAACAAAGACCCAAGGCCAATGT
GCCATATAGTGGATGTCACAAGCTGGGTTGCAGCTACACAAGGCATTGCT
GAGTTTCCTGTAGGTTTCTCTGGGCTTGGAATATTTTTCGTTTTTAAATG
ACATTGTGTACGGGTGTGGAGGGGGAGCCCATGTGCTACAACAGTGTGGA
GATCAGAGGACAACCTGTGGGAGTCCAGTTGGTTCTTTCCTTTTATCACG
TGGGTCGTAGGGATCAAAGTCAGGCTGTCAGGCTTGGCAGCAAGCGCTTT
ACCTGCTGAGCTATCTCATCAGCCCCGTGCTCAGAACATTTGTTTGAAAA
AACAGAGAGCCCATATGCTTACACTGCTTCTCTAAGGAGTTGGGGGAAGG
TAGTCTGAGGAACCCAAGCTGGTTCCTTCTGC

Query= MSMg01no183_b05.b1 MSMg01no183_b05.b1 CHROMAT_FILE:
MSMg01no183_b05.b1 PHD_FILE: MSMg01no183_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:00 2005
         (659 letters)



>mm_chr12_103408026_103409084
          Length = 1059

 Score = 1143 bits (591), Expect = 0.0
 Identities = 639/655 (97%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcccattgcctttggaagcaattgagggttcactgtaaagagaaggaagctgggag 64
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 205 gaattcccattgcctttggaagcaattgagggttcactgcaaagagaaggaagctgggag 264

                                                                       
Query: 65  catatggaagaatgtaactaagagggagtatacattagattgccaattcctgtggtccct 124
           ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 265 catatggaagaatgtaattaagagggagtatacattagattgccaatacctgtggtccct 324

                                                                       
Query: 125 tttcccatctcagccagccagtggccaggcctggttcctgccaggagactagaaaattct 184
           || ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 325 ttccccatctcagccaaccagtggccaggtctggttcctgccaggagactagaaaattct 384

                                                                       
Query: 185 tctctgggaggactgttcagcctgaatgaagaactctacagaccctttctccagaggtat 244
           ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 385 tctctgggaggactgctcagcctgagtgaagaactctacagaccctttctccagagatat 444

                                                                       
Query: 245 ctaccaaagtctcttcatcaccctattacaaggtctgtcgccaccaacttcacccacaca 304
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 445 ctaccaaagtctcttcatcaccctattacaaggtctgtcgccaccaacttcaccaacaca 504

                                                                       
Query: 305 cacctagagctggctggaatacctcatgaacaaccaagataggcatgacctcatgaatcc 364
           |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 505 cacctagagctggctggaatacctcatgaagaaccaagaaaggcatgacctcatgaatcc 564

                                                                       
Query: 365 aagacaaacagcttttattcaccaagctatgcggacatattgtagacagcaaacatgaag 424
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 565 aagacaaacagcttttattcaccaagctattcggacatattgtagacagcaaacatgaag 624

                                                                       
Query: 425 ctctgggacacccgtcaaccccaggataaaactcgcacccacaaaataatcacttaacaa 484
           ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 625 ctctgggacacccttcaaccccaggataaaacccgcacccacaaaataatcacttaacaa 684

                                                                       
Query: 485 aacaatggcattgaaattgcctgcctttcccccacccccctcacacactgttataactgc 544
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 685 aacaatggcattgaaattgcctgccttccccccacccccctcacacactgttataactgc 744

                                                                       
Query: 545 caagagaaacaacttgaaggcgacattcatgaagggtgggagatgaaagctgagaaccac 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 caagagaaacaacttgaaggcgacattcatgaagggtgggagatgaaagctgagaaccac 804

                                                                  
Query: 605 atgatgccggaaggaaagcaggctttgtcttccccatggaatatactcttgctgg 659
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 atgatgccggaaggaaagcaggctttgtcttccccatggaatatactcttgctgg 859


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space:   680801
Effective search space used:   680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no183_b05.g1 MSMg01no183_b05.g1 CHROMAT_FILE:
MSMg01no183_b05.g1 PHD_FILE: MSMg01no183_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:00 2005
         (657 letters)



>mm_chr12_103543347_103544403
          Length = 1057

 Score = 1131 bits (585), Expect = 0.0
 Identities = 597/601 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttgttctgttcttgcagctaccctgggagtctggaatggagcccaaagagaaagtccta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttgttctgttcttgcagctaccctgggagtctggaatggagcccaaagagaaagtccta 542

                                                                       
Query: 61  aaatcaaacaaacaaaaccaccagaatacgcagagcaataaacatactgcatctatgctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaatcaaacaaacaaaaccaccagaatacgcagagcaataaacatactgcatctatgctc 482

                                                                       
Query: 121 actcctaagacattcagaacagctgtgcatttgctctgtggacacagcttacccatgtgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 actcctaagacattcagaacagctgtgcatttgctctgtggacacagcttacccatgtgg 422

                                                                       
Query: 181 gtgagggtgctccctgagtgcatcctggcagggataagggaacctttgaccagacttcta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtgagggtgctccctgagtgcatcctggcagggataagggaacctttgaccagacttcta 362

                                                                       
Query: 241 agacttactgaaaaacaaagacccaaggccaatgtgccatatagtggatgtcacaagctg 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agacttaccgaaaaacaaagacccaaggccaatgtgccatatagtggatgtcacaagctg 302

                                                                       
Query: 301 ggttgcagctacacaaggcattgctgagtttcctgtaggtttctctgggcttggaatatt 360
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 301 ggttgcagctacacaaggcattgccgagtttcctgtaggtttctctgggcttggaatatt 242

                                                                       
Query: 361 tttcgtttttaaatgacattgtgtacgggtgtggagggggagcccatgtgctacaacagt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttcgtttttaaatgacattgtgtacgggtgtggagggggagcccatgtgctacaacagt 182

                                                                       
Query: 421 gtggagatcagaggacaacctgtgggagtccagttggttctttccttttatcacgtgggt 480
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtggaggtcagaggacaacctgtgggagtccagttggttctttccttttatcacgtgggt 122

                                                                       
Query: 481 cgtagggatcaaagtcaggctgtcaggcttggcagcaagcgctttacctgctgagctatc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtagggatcaaagtcaggctgtcaggcttggcagcaagcgctttacctgctgagctatc 62

                                                                       
Query: 541 tcatcagccccgtgctcagaacatttgtttgaaaaaacagagagcccatatgcttacact 600
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tcatcagccccgtgctcagtacatttgtttgaaaaaacagagagcccatatgcttacact 2

            
Query: 601 g 601
           |
Sbjct: 1   g 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)