Query= MSMg01no183_e04.b1 MSMg01no183_e04.b1 CHROMAT_FILE:
MSMg01no183_e04.b1 PHD_FILE: MSMg01no183_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:13 2005
(564 letters)
>mm_chr12_43221405_43222368
Length = 964
Score = 1040 bits (538), Expect = 0.0
Identities = 550/554 (99%)
Strand = Plus / Plus
Query: 9 tccatagttggcactagcaagctattatattttggccacatttagcaaaaatatatactt 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tccatagttggcactagcaagctattatattttggccacatttagcaaaaatatatactt 268
Query: 69 aggtaaattaaaaaagaatcttgtgagacttgaaatccttatgatattttaaagcagttt 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aggtaaattaaaaaagaatcttgtgagacttgaaatccttatgatattttaaagcagttt 328
Query: 129 ttctccttcaagttttgaaatgggcagactctgtactgtaaatgaaagcttaacccagaa 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttctccttcaagttttgaaatgggcagactctgtactgtaaatgaaagcttaacccagaa 388
Query: 189 aggtaaggtacaaatccgattaaagtggtagtgttctgaggtttagggtcgctttgcctg 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aggtaaggtacaaatccgattaaagtggtagtgttctgaggtttagggtcgctttgcctg 448
Query: 249 gattctggacttttaagtctttgaagttaagggttgtgtttgggatgtcagtaaagccat 308
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 449 cattctggacttttaagtctttaaagttaagggttgtgtttgggatgtcagtaaagccat 508
Query: 309 ttaccctgtattcttttcactataaaacgatcgcctactagcattgaggtaattggtgtt 368
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ttactctgtattcttttcactataaaacgatcgcctactagcattgaggtaattggtgtt 568
Query: 369 ttcataggttatgaatagggagggcgctttggaatctgcaggtctatgtgataaatagta 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttcataggttatgaatagggagggcgctttggaatctgcaggtctatgtgataaatagta 628
Query: 429 aagtgacagagggtgaatttctgtgcagaaaaccatgagcactagaggtcagtaggaaga 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aagtgacagagggtgaatttctgtgcagaaaaccatgagcactagaggtcagtaggaaga 688
Query: 489 tctctggtactagagggttgacaggaccaggtagcaaggaaggatatatagatgcatttc 548
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 689 tctctggtactagagggttgacaggatcaggtagcaaggaaggatatatagatgcatttc 748
Query: 549 ctactatcctatgg 562
||||||||||||||
Sbjct: 749 ctactatcctatgg 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_e04.g1 MSMg01no183_e04.g1 CHROMAT_FILE:
MSMg01no183_e04.g1 PHD_FILE: MSMg01no183_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:14 2005
(612 letters)
>mm_chr12_43313174_43314185
Length = 1012
Score = 733 bits (379), Expect = 0.0
Identities = 389/395 (98%), Gaps = 5/395 (1%)
Strand = Plus / Minus
Query: 223 caggagtgactatggcatgccttactccaaatttaaagacatcagaaccagggaagtgat 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 caggagtgactatggcatgccttactccaaatttaaagacatcagaaccagggaagtgat 953
Query: 283 gtaatttaatttaactcaatcaggtgaaagatttgagaacctggtgaatagatgat---- 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 gtaatttaatttaactcaatcaggtgaaagatttgagaacctggtgaatagatgatacaa 893
Query: 339 -acctggagaccaaaggctagtgaatagaaaattcttatgttcaaggacattaggagaca 397
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 aacctggagaccaaaggctagtgaatagaaaattcttatgttcaaggacattaggagaca 833
Query: 398 ctagtcccaggacagagagatgtggggaaagagcagggagggaacaaaagatagtataag 457
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 832 ctagtcccaggacagagagatgtggggaaagagcagggagggaacaaaagatagtagaag 773
Query: 458 atgagaagatagtaacaaggattccactgggaatctggctaaattgtgtttatattgtat 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 atgagaagatagtaacaaggattccactgggaatctggctaaattgtgtttatattgtat 713
Query: 518 tctgaaaaagaacctatctgatgttgaatgtacaactaacattaatttgacaaatgactt 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 tctgaaaaagaacctatctgatgttgaatgtacaactaacattaatttgacaaatgactt 653
Query: 578 ataagacagtgtacaatttaggctgaggctgtgtg 612
|||||||||||||||||||||||||||||||||||
Sbjct: 652 ataagacagtgtacaatttaggctgaggctgtgtg 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space: 603204
Effective search space used: 603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
