Query= MSMg01no183_f19.b1 MSMg01no183_f19.b1 CHROMAT_FILE:
MSMg01no183_f19.b1 PHD_FILE: MSMg01no183_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:21 2005
(676 letters)
>mm_chr12_14044188_14045261
Length = 1074
Score = 1243 bits (643), Expect = 0.0
Identities = 665/673 (98%), Gaps = 3/673 (0%)
Strand = Plus / Plus
Query: 5 gaattcaggtctaattac-cacacactgtgatagattttaaggctcagtgcctggggctc 63
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcaggtctaagtacacacacactgtgatagattttaaggctcagtgcctggggctc 263
Query: 64 cagatcaataacatcccctgtggctggaggcctgtgagatgtattctcatgccaaccata 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cagatcaataacattccctgtggctggaggcctgtgagatgtattctcatgccaaccata 323
Query: 124 ccctctctgtgagaagcaaatggtattgtctcagagcaccagagaaaacatccatgctgg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccctctctgtgagaagcaaatggtattgtctcagagcaccagagaaaacatccatgctgg 383
Query: 184 gaaacccacagcctccagcaagtctctaagaggtaagaaggtttggggacatgtcccttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaaacccacagcctccagcaagtctctaagaggtaagaaggtttggggacatgtcccttt 443
Query: 244 tatgagctaggagagtaatgcaagaaacactgagacgtaggacagggtggtggtagcctg 303
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 444 tatgagctaggagagtaatgcaagaaacactgagatgtaggacagggtggtggtagcctg 503
Query: 304 agaaacttcaggaggtataaatgaccacagatgcacatgatatttgatagaacttttatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agaaacttcaggaggtataaatgaccacagatgcacatgatatttgatagaacttttatt 563
Query: 364 attggatttaccaaacaagcaaacaaataaacaaataacccttaacattaaaaccaggtg 423
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 attggatttacaaaacaagcaaacaaataaacaaataacccttaacattaaaaccaggtg 623
Query: 424 cctggataaagcaacccatgcttgctaattagtatatctttgatggaggttacatacctc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cctggataaagcaacccatgcttgctaattagtatatctttgatggaggttacatacctc 683
Query: 484 tgtagagtgagccagctgatgcttcctcatacaaaatacctagtgttaaagcaaaatttg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgtagagtgagccagctgatgcttcctcatacaaaatacctagtgttaaagcaaaatttg 743
Query: 544 aatcctgcaattgctgaagtgataaatggttgtaaactgacattagattaacgactattt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aatcctgcaattgctgaagtgataaatggttgtaaactgacattagattaacgactattt 803
Query: 604 tcagagcgcagtgaattcagcatgtgcataaccttaaataaagccactatgctttccaga 663
|||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 804 tcagagcgcagtgaattcagcatg--cataaccttagataaagccactatgctttccaga 861
Query: 664 aattatggaacca 676
|||||||||||||
Sbjct: 862 aattatggaacca 874
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1074
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1064
Effective search space: 708624
Effective search space used: 708624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_f19.g1 MSMg01no183_f19.g1 CHROMAT_FILE:
MSMg01no183_f19.g1 PHD_FILE: MSMg01no183_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:21 2005
(288 letters)
>mm_chr12_14198975_14199662
Length = 688
Score = 528 bits (273), Expect = e-154
Identities = 282/285 (98%)
Strand = Plus / Minus
Query: 1 agcacagtaagacccatttcagacttaacagaatcaaaagattaatgcggttgtttggag 60
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 485 agcacagtaagacccatttcagacttaacagaatcaaaagatgaatgtggttgtttggag 426
Query: 61 ccatggcatatgtaatcatgtcttagatttgtccagaattgagtagactttttttttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ccatggcatatgtaatcatgtcttagatttgtccagaattgagtagactttttttttctt 366
Query: 121 cctgttacaagttgtttgtctcagccagatgcagcaacctgggagagagcctggttttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cctgttacaagttgtttgtctcagccagatgcagcaacctgggagagagcctggttttca 306
Query: 181 gacacagatcctggaccaccttctactggagggttacaagtgtttgcttccctctagcat 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 305 gacacagatcctggaccaccttctactggagggttacaaatgtttgcttccctctagcat 246
Query: 241 ggaaggtttacaaatacaactttccagagagtcagaaaagactta 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ggaaggtttacaaatacaactttccagagagtcagaaaagactta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
