Query= MSMg01no183_p19.b1 MSMg01no183_p19.b1 CHROMAT_FILE:
MSMg01no183_p19.b1 PHD_FILE: MSMg01no183_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:09 2005
(235 letters)
>mm_chr12_17418441_17419075
Length = 635
Score = 431 bits (223), Expect = e-125
Identities = 232/235 (98%)
Strand = Plus / Minus
Query: 1 acagcctggaaggcacctagcacggtacggtggtcacgagagctttgccaggatagtgcc 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 435 acagcctggaaggcacctagcacggcacggtggtcacgagagctttgccaggatagtgcc 376
Query: 61 tctcctatttcaggagtaagccctctcagcactgtctggagggtgcagtgtgacgctgct 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 375 tctcctatttcaggagtaagccctctcagcaccgtctggagggtgcagtgtgacgctgct 316
Query: 121 gtgagaacttgtgtcttgtatttaccctcatgagccctcactgggcactcatctggtgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gtgagaacttgtgtcttgtatttaccctcatgagccctcactgggcactcatctggtgaa 256
Query: 181 tgcaaagtatctgggtataaactgcattccttcaaagacccagagttctttcaat 235
||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgcaaagtatctgggtagaaactgcattccttcaaagacccagagttctttcaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no183_p19.g1 MSMg01no183_p19.g1 CHROMAT_FILE:
MSMg01no183_p19.g1 PHD_FILE: MSMg01no183_p19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:09 2005
(290 letters)
>mm_chr12_17238593_17239282
Length = 690
Score = 489 bits (253), Expect = e-143
Identities = 281/291 (96%), Gaps = 4/291 (1%)
Strand = Plus / Plus
Query: 1 agacaacccactggtgtttccgttaaacagtccacccactgttctttctgaaaatcttgg 60
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 agacaatccactggtgtttccgttaaacagtccaccaactgttctttctgaaaatcttgg 260
Query: 61 gggagaaccatcaaatctgtgctggggagtctggaaaataaaactacgtaaatgaccaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggagaaccatcaaatctgtgctggggagtctggaaaataaaactacgtaaatgaccaga 320
Query: 121 gagcagcaccaaggtgtgttacaatgaaggctgatggtggtttcaactctgatgttgggg 180
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagcagcaccaaggtgtgttatgatgaaggctgatggtggtttcaactctgatgttgggg 380
Query: 181 taacggactaggatgctacagcctaaaggataaccaatgagaaacagcacaa-aggggca 239
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 381 taacggactaggatgctacagcctaaaggataaccaatgagaaacagca-aagaggggca 439
Query: 240 gaggggtgctctctctctctctctctctctctctctct--ggttttcgaga 288
|||| |||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 440 gaggagtgccctctctctctctctctctctctctctctttggttttcgaga 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
