Query= MSMg01no184_n11.b1 MSMg01no184_n11.b1 CHROMAT_FILE:
MSMg01no184_n11.b1 PHD_FILE: MSMg01no184_n11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:23 2005
(310 letters)
>mm_chr12_43182711_43183421
Length = 711
Score = 557 bits (288), Expect = e-163
Identities = 300/304 (98%), Gaps = 1/304 (0%)
Strand = Plus / Plus
Query: 4 ggaattcccctttttc-atgtggactttacctactgtggtttttccacagtatggaactc 62
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcccctttttcaatgtggactttacctactgtggtttttccacagtatggaactc 263
Query: 63 tgtgctatcagaaaccagtgggttaggttacagagttgaagacgcctagactgttttcca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtgctatcagaaaccagtgggttaggttacagagttgaagacgcctagactgttttcca 323
Query: 123 gttatcccagatgtcatgttctataaactggagtccaggaagccttgtcttgtttaattg 182
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gttatcgcagatgtcatgttctataaactggagtccaggaagccttgtcttgtttaattg 383
Query: 183 ctgttctcattttcatctcttaaatacgatggtttgtgccataggatttctagggcaggg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgttctcattttcatctcttaaatacgatggtttgtgccataggatttctagggcaggg 443
Query: 243 cctcttgtttttgttgcctgggttttgttgccagtggtggtttctatttcccacttaata 302
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 444 cctcttgtttttgatgcctgggttttgttgccagtggtggtttttatttcccacttaata 503
Query: 303 ctct 306
||||
Sbjct: 504 ctct 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 711
Length adjustment: 9
Effective length of query: 301
Effective length of database: 702
Effective search space: 211302
Effective search space used: 211302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_n11.g1 MSMg01no184_n11.g1 CHROMAT_FILE:
MSMg01no184_n11.g1 PHD_FILE: MSMg01no184_n11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:23 2005
(285 letters)
>mm_chr12_43273863_43274547
Length = 685
Score = 536 bits (277), Expect = e-157
Identities = 280/281 (99%)
Strand = Plus / Minus
Query: 1 agaggctccctgacacacagaaggtatgaaacaacaacatagcaagcctatgaagttccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agaggctccctgacacacagaaggtatgaaacaacaacatagcaagcctatgaagttccc 422
Query: 61 ttactttgagagtcaaatatgatttgattaaaacacggcctcagtcattactcagactaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttactttgagagtcaaatatgatttgattaaaacacggcctcagtcattactcagactaa 362
Query: 121 gacactaggcaatatatacatgagtttctactaagatcaccaaagtcgtcccctatagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gacactaggcaatatatacatgagtttctactaagatcaccaaagtcgtcccctatagac 302
Query: 181 gagaaatggagaaaaatcgggatcccttgaactttaaaacatatggaatcttttttgagg 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 301 gagaaatggagaaaaatcgggatcccttgaactttaaaacatatggaatcctttttgagg 242
Query: 241 cacatgacttgcctaactctggaaaaacatatatttgatgg 281
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacatgacttgcctaactctggaaaaacatatatttgatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
