Query= MSMg01no185_b08.b1 MSMg01no185_b08.b1 CHROMAT_FILE:
MSMg01no185_b08.b1 PHD_FILE: MSMg01no185_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:42 2005
(266 letters)
>mm_chr12_113275879_113276542
Length = 664
Score = 470 bits (243), Expect = e-137
Identities = 258/263 (98%), Gaps = 2/263 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttcccttatccttaggataaaaatgtcaagaggaagttttatgttcattcgt 63
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttcccttatt-ttaggataaaaatgtcaagaggaagttttatgttcattcgt 262
Query: 64 tttccctttacatcctgtatcatttactgtctttctgctctaagaggtgaataatatttc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tttccctttacatcctgtatcatttactgtctttctgctctaagaggtgaataatatttc 322
Query: 124 tagtgcctgtttgataatcatgtattttgtgttagcattatattgagctgagtgtggact 183
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Sbjct: 323 tagtgcctgtttgataatcatgtattttgtgttagcattatattgagctgagtgtggact 382
Query: 184 cttttttttaaaaaaaatacgtttttataaaagatttgtgtatatgagtgctctatctgc 243
|||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 383 cttttttt-aaaaaaaataggtttttaaaaaagatttgtgtatatgagtgctctatctgc 441
Query: 244 atgtcaaaagagggtatcagatt 266
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Sbjct: 442 atgtcaaaagagggtatcagatt 464
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 266
Length of database: 664
Length adjustment: 9
Effective length of query: 257
Effective length of database: 655
Effective search space: 168335
Effective search space used: 168335
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no185_b08.g1 MSMg01no185_b08.g1 CHROMAT_FILE:
MSMg01no185_b08.g1 PHD_FILE: MSMg01no185_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:42 2005
(103 letters)
>mm_chr12_113433878_113434380
Length = 503
Score = 199 bits (103), Expect = 3e-56
Identities = 103/103 (100%)
Strand = Plus / Minus
Query: 1 aagggaaatctgataggccatgaattggaaggagaaaggggtcatcttatgcccatgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aagggaaatctgataggccatgaattggaaggagaaaggggtcatcttatgcccatgtag 244
Query: 61 tctgctacccacctcataaatactcataaaaaggctcttaaca 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tctgctacccacctcataaatactcataaaaaggctcttaaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 103
Length of database: 503
Length adjustment: 8
Effective length of query: 95
Effective length of database: 495
Effective search space: 47025
Effective search space used: 47025
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|