Query= MSMg01no187_h10.b1 MSMg01no187_h10.b1 CHROMAT_FILE:
MSMg01no187_h10.b1 PHD_FILE: MSMg01no187_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:47 2005
(194 letters)
>mm_chr12_9870486_9871080
Length = 595
Score = 279 bits (144), Expect = 1e-79
Identities = 162/168 (96%), Gaps = 1/168 (0%)
Strand = Plus / Plus
Query: 8 ggaattctctttatttcctgcagtgtaatgctcaatccccattgtgtcactcactcatcc 67
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ggaattctctttagctcctgcagtgtaatgctcaatccccattgtgtcactcactcatcc 267
Query: 68 accctttaatgacc-gcctagaagatcatgttttacttgagtctgagacagacagataga 126
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 accctttaatgacatgtatagaagatcatgttttacttgagtctgagacagacagataga 327
Query: 127 tgatagatagatagatagatagatagatagatagatagatagatagat 174
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tgatagatagatagatagatagatagatagatagatagatagatagat 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 595
Length adjustment: 8
Effective length of query: 186
Effective length of database: 587
Effective search space: 109182
Effective search space used: 109182
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no187_h10.g1 MSMg01no187_h10.g1 CHROMAT_FILE:
MSMg01no187_h10.g1 PHD_FILE: MSMg01no187_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:47 2005
(613 letters)
>mm_chr12_9926576_9927588
Length = 1013
Score = 1083 bits (560), Expect = 0.0
Identities = 586/596 (98%), Gaps = 3/596 (0%)
Strand = Plus / Minus
Query: 1 acagctattgctacaaccctttgcattcatattccaggaaaatgaattgtaaaatattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 acagctattgctacaaccctttgcattcatattccaggaaaatgaattgtaaaatattca 534
Query: 61 agctgataagaacccctagaaacaatcaagtctaacctcatattataaattggtaagctg 120
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 533 agctgataagaacccctagaaacaatcaggtctaacctcttattataaattggtaagctg 474
Query: 121 caagtaagaggagaaaaacaaaacagaacaaaacaatactgggtcagagaagaactatag 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 caagtaagagaagaaaaacaaaacagaacaaaacaatactgggtcagagaagaactatag 414
Query: 181 tactgtgatgtctagatatacctgccttcaaactctcagcctagtgatgtcttttaaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tactgtgatgtctagatatacctgccttcaaactctcagcctagtgatgtcttttaaatg 354
Query: 241 agacctaactttctgtctttgtaaccaagctagataataataataataataataataaac 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 353 agacctaactttctgtctttgtaaccaagctag---ataataataataataataataaac 297
Query: 301 cattgagatgtagtattaacaattaagtcggtcttgacctcgatactctttgaagagtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 cattgagatgtagtattaacaattaagtcggtcttgacctcgatactctttgaagagtca 237
Query: 361 ttgttggtcttttcttagaggtttctagaaaaactcataacactctattcgttatgaccc 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 ttgttgctcttttcttagaggtttctagaaaaactcataacactctattcgttatgaccc 177
Query: 421 tcacttaagacaagtatcaatattaccatgaagggagtttgggaaagagtacttgccatt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tcacttaagacaagtatcaatattaccatgaagggagtttgggaaagagtacttgccatg 117
Query: 481 atccagtgttggctaagattaaagagtcataactgtatcaggcagaaaggaaattttaat 540
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 116 atccagtgttggctaagattaaagagtcataattgtatcaggcagaaaggaaattttaat 57
Query: 541 atctcgtgtgatgtggggcactgaactgtgcacagacagcctggttccgagagatc 596
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 acctcgtgtgatgtggggcactgaactgtgcacagacagcctggttccgagagatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space: 604809
Effective search space used: 604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
