Query= MSMg01no189_l15.b1 MSMg01no189_l15.b1 CHROMAT_FILE:
MSMg01no189_l15.b1 PHD_FILE: MSMg01no189_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:46 2005
(221 letters)
>mm_chr12_7603193_7603814
Length = 622
Score = 373 bits (193), Expect = e-108
Identities = 199/201 (99%), Gaps = 1/201 (0%)
Strand = Plus / Minus
Query: 1 ggcagaggcagggcatgggaatcaagatttagtatgggacaaatctggttctgaaatgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ggcagaggcagggcatgggaatcaagatttagtatgggacaaatctggttctgaaatgag 292
Query: 61 agcatgccctaggaaagggacagaacaatgatcttt-gtggggggggcaaggtgagagct 119
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 291 agcatgccctaggaaagggacagaacaatgatctttgggggggggggcaaggtgagagct 232
Query: 120 gtgggtactattacctaccagcctatgacattctctctctctctctctctctctctctct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gtgggtactattacctaccagcctatgacattctctctctctctctctctctctctctct 172
Query: 180 ctctctctctctctctctctc 200
|||||||||||||||||||||
Sbjct: 171 ctctctctctctctctctctc 151
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 68
Number of extensions: 33
Number of successful extensions: 33
Number of sequences better than 10.0: 1
Number of HSP's gapped: 30
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 622
Length adjustment: 9
Effective length of query: 212
Effective length of database: 613
Effective search space: 129956
Effective search space used: 129956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no189_l15.g1 MSMg01no189_l15.g1 CHROMAT_FILE:
MSMg01no189_l15.g1 PHD_FILE: MSMg01no189_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:46 2005
(288 letters)
>mm_chr12_7539664_7540351
Length = 688
Score = 505 bits (261), Expect = e-147
Identities = 282/289 (97%), Gaps = 2/289 (0%)
Strand = Plus / Plus
Query: 1 actgtagactcctaacaaaatatacatgtagtaaagacacttct-atgcccttaccttaa 59
|||||||||||||||||||||||||||||||||||||||||| | ||| | |||||||||
Sbjct: 201 actgtagactcctaacaaaatatacatgtagtaaagacactt-taatgacattaccttaa 259
Query: 60 gaaatgtcaaaacaaaaaagttatatgttcatcagtaatgaatggataaagaaaatataa 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 260 gaaatgtcaaaacaaaaaagttatatgttcatcagtaatgaatggataaagaaaatatga 319
Query: 120 tatacatatgtatgtatatattatatgtacataagcatgtatgggtacatatatataaag 179
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 320 tatacatatgtatgtatatattatatgtacataaacatgtatgtgtacatatatataaag 379
Query: 180 tgattaaattaaaacaaacttgtatcctgatcagtcctacatgctttccagaaagacctt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgattaaattaaaacaaacttgtatcctgatcagtcctacatgctttccagaaagacctt 439
Query: 240 aacacctgagttttagtgtctcaccaaggacccttcccttccctgtata 288
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aacacctgagttttagtgtctcaccaaggacccttcccttccctgtata 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
