Query= MSMg01no189_m15.b1 MSMg01no189_m15.b1 CHROMAT_FILE:
MSMg01no189_m15.b1 PHD_FILE: MSMg01no189_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:51 2005
(315 letters)
>mm_chr12_6010407_6011121
Length = 715
Score = 582 bits (301), Expect = e-171
Identities = 307/309 (99%)
Strand = Plus / Plus
Query: 5 gaattctctgggcacaggcacacatgtggcatagacaacacaaataaaaattaaacctta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctgggcacaggcacacatgtggcatagacaacacaaataaaaattaaacctta 264
Query: 65 aaaattgtattgtttaaagaaattgtttaaagaaatgtcactacaaaatagttaacagaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaattgtattgtttaaagaaattgtttaaagaaatgtcactacaaaatagttaacagaa 324
Query: 125 tggcacataattaagacctggataatagtaatatttgacgtgatatggtgacatatggta 184
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 325 tggcacataattaagacctggataatagtaatatttgatgtgatatggtgacatatggta 384
Query: 185 gtatgtggtaatatattgtgtaaaggaattcctttcataaccctacatgtatatacggtc 244
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtatgtggtaatatattgtggaaaggaattcctttcataaccctacatgtatatacggtc 444
Query: 245 atttacttttacaaagtattctgtaatgtgggtggagttaagttagtagtcttgcatgat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atttacttttacaaagtattctgtaatgtgggtggagttaagttagtagtcttgcatgat 504
Query: 305 tatctagat 313
|||||||||
Sbjct: 505 tatctagat 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no189_m15.g1 MSMg01no189_m15.g1 CHROMAT_FILE:
MSMg01no189_m15.g1 PHD_FILE: MSMg01no189_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:51 2005
(287 letters)
>mm_chr12_6097312_6097998
Length = 687
Score = 555 bits (287), Expect = e-162
Identities = 287/287 (100%)
Strand = Plus / Minus
Query: 1 tagaagcaatagaatgagttcaagtttctgaactaaagagatggtagaactgcttttaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tagaagcaatagaatgagttcaagtttctgaactaaagagatggtagaactgcttttaat 428
Query: 61 gtggtaaggcagggccagatcagattaaatcagacagactatagtcaggagtcattctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gtggtaaggcagggccagatcagattaaatcagacagactatagtcaggagtcattctac 368
Query: 121 aaatgaaggaaatacattaaggattaagtatttaattatgcttcattcattcatctgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aaatgaaggaaatacattaaggattaagtatttaattatgcttcattcattcatctgttc 308
Query: 181 ctgttacttattaaatgtacaagtatattttagaaatatctttagcaacaatgttaaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ctgttacttattaaatgtacaagtatattttagaaatatctttagcaacaatgttaaatg 248
Query: 241 aaaacagacttcaaagttaaccagaaagttttaattgaatctccatt 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 aaaacagacttcaaagttaaccagaaagttttaattgaatctccatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
