Query= MSMg01no192_o19.b1 MSMg01no192_o19.b1 CHROMAT_FILE:
MSMg01no192_o19.b1 PHD_FILE: MSMg01no192_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:59 2005
(410 letters)
>mm_chr12_64884920_64885729
Length = 810
Score = 636 bits (329), Expect = 0.0
Identities = 347/353 (98%), Gaps = 1/353 (0%)
Strand = Plus / Minus
Query: 5 gaattctgctcaaggtcattagtcaaactttagtgtacaataagtagcttaaatctagta 64
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 352 gaattctgctcaaggtcattagtaaaactttagtgtacaataagtagcttaaatctagta 293
Query: 65 aatacaaggtgccttagactattattcagagttttcttcgcaaacatctaatatgtaaat 124
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aataaaaggtgccttagactattattcagagttttcttcgcaaacatctaatatgtaaat 233
Query: 125 ataaactctgggggaacgtagtgtttttggatatataaaccattgcatgttagaagagga 184
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 232 ataaactctgggggaatgtagtgtttttggatatataacccattgcatgttagaagagga 173
Query: 185 acttaaaagaccatttcattttgaagttggaaagcagtaataagagaaatgcagctagct 244
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 172 acttaaaagaccatttca-tttgaagttgcaaagcagtaataagagaaatgcagctagct 114
Query: 245 gcagcaggctgatgatgtttcagggataaacaaggactctattagaactgtgttagggaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 gcagcaggctgatgatgtttcagggataaacaaggactctattagaactgtgttagggaa 54
Query: 305 tttcattctgtccatgccttgataactttattgaagttgaaatcagaggcaat 357
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 tttcattctgtccatgccttgataactttattgaagttgaaatcagaggcaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_o19.g1 MSMg01no192_o19.g1 CHROMAT_FILE:
MSMg01no192_o19.g1 PHD_FILE: MSMg01no192_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:59 2005
(381 letters)
>mm_chr12_64727105_64727885
Length = 781
Score = 721 bits (373), Expect = 0.0
Identities = 379/381 (99%)
Strand = Plus / Plus
Query: 1 taaggatttttattgtaggcataaaagagatatcagcctggctcagcttcccagaacagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaggatttttattgtaggcataaaagagatatcagcctggctcagcttcccagaacagt 260
Query: 61 agtcaatcattaattccagaaaactgagcaagtgactataaaaactatatgatgcattag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtcaatcattaattccagaaaactgagcaagtgactataaaaactatatgatgcattag 320
Query: 121 attttgttctagatggtgttactacacagataagaacaaaagatactttgtgttggcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attttgttctagatggtgttactacacagataagaacaaaagatactttgtgttggcatt 380
Query: 181 ggagatcaaattcacagcaagtagatcttttagctctcatttctcgaattataaaataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagatcaaattcacagcaagtagatcttttagctctcatttctcgaattataaaataaa 440
Query: 241 gatgaaatactcagccttgcttctcactgagatgtcttccttcctgcctggattcttcct 300
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 441 gatgaaatactcagccttgcttctcactggggtgtcttccttcctgcctggattcttcct 500
Query: 301 gaaatacagactagtggttgaagtcaaaatctatcaatgtgctaatgctggcagtagatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaatacagactagtggttgaagtcaaaatctatcaatgtgctaatgctggcagtagatt 560
Query: 361 ataagaaataaagaccatgct 381
|||||||||||||||||||||
Sbjct: 561 ataagaaataaagaccatgct 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
