Query= MSMg01no194_i20.b1 MSMg01no194_i20.b1 CHROMAT_FILE:
MSMg01no194_i20.b1 PHD_FILE: MSMg01no194_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:27 2005
(631 letters)
>mm_chr12_62942783_62943818
Length = 1036
Score = 1191 bits (616), Expect = 0.0
Identities = 626/632 (99%), Gaps = 5/632 (0%)
Strand = Plus / Minus
Query: 5 gtgacaatctcaatcaagagac-----ttttttttttaatgtttagagaaatctctgaag 59
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 836 gtgacaatctcaatcaagagactttttttttttttttaatgtttagagaaatctctgaag 777
Query: 60 ccattccatagacatgatttttctgtgttcctatttattgctaacttttttctaagatgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 ccattccatagacatgatttttctgtgttcctatttattgctaacttttttctaagatgt 717
Query: 120 aaccaagtacaatttaaagtattattgttttggaaataaagagtgaaactaaaattgttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 aaccaagtacaatttaaagtattattgttttggaaataaagagtgaaactaaaattgttt 657
Query: 180 cctgaaaatgaattataaatatttcaaaccatggtaaaaactaaaatggaacacgacata 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 cctgaaaatgaattataaatatttcaaaccatggtaaaaactaaaatggaacacgacata 597
Query: 240 catagtgtgctctgaatgcagcagaaaatttgcaagagcatgtattcataaccaaaatca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 catagtgtgctctgaatgcagcagaaaatttgcaagagcatgtattcataaccaaaatca 537
Query: 300 atgctgccaataagtcagtgtattgtaaatgttggatatcaatatataaactttataaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 atgctgccaataagtcagtgtattgtaaatgttggatatcaatatataaactttataaaa 477
Query: 360 tgcaatggaatggatattgatgttctgaagataacattcactctggtcaggaattcagca 419
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tgcaatggattggatattgatgttctgaagataacattcactctggtcaggaattcagca 417
Query: 420 aggatctcagcaccacaaagaatttttttctttgggattttgccagtaaaatgtggacag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aggatctcagcaccacaaagaatttttttctttgggattttgccagtaaaatgtggacag 357
Query: 480 agttaacacttataatgtatggacaatacaggaaagtggggtgaggtcagtatttctcat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 agttaacacttataatgtatggacaatacaggaaagtggggtgaggtcagtatttctcat 297
Query: 540 tgaacagcaattgaatatcatctgtggagagtgtggagagcctgtgaaacagcagtaaac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tgaacagcaattgaatatcatctgtggagagtgtggagagcctgtgaaacagcagtaaac 237
Query: 600 tacattctgctaatactcatatgtcacagtgt 631
||||||||||||||||||||||||||||||||
Sbjct: 236 tacattctgctaatactcatatgtcacagtgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1036
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1026
Effective search space: 637146
Effective search space used: 637146
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_i20.g1 MSMg01no194_i20.g1 CHROMAT_FILE:
MSMg01no194_i20.g1 PHD_FILE: MSMg01no194_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:27 2005
(668 letters)
>mm_chr12_62875844_62876910
Length = 1067
Score = 1268 bits (656), Expect = 0.0
Identities = 665/668 (99%), Gaps = 1/668 (0%)
Strand = Plus / Plus
Query: 1 accttaatctaatatatgtcttgtataaaaataaaacatgagatgttataattaatgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accttaatctaatatatgtcttgtataaaaataaaacatgagatgttataattaatgaaa 260
Query: 61 gtcgatgaaagattcttttctaatatctctaacaagacaagaaagcttggttttatcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcgatgaaagattcttttctaatatctctaacaagacaagaaagcttggttttatcaca 320
Query: 121 attgctcagactagtactggaatatagatgttaatagaaaaacaaaaacaaaaacaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attgctcagactagtactggaatatagatgttaatagaaaaacaaaaacaaaaacaaaaa 380
Query: 181 acaaaaaacaaacaaacaaacaaacaaacccaaaaaactaaagagcctagagaaaaagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaaaaaacaaacaaacaaacaaacaaacccaaaaaactaaagagcctagagaaaaagac 440
Query: 241 agaaattgaacaatccctggttacattacatgatatatacagacaggctccattaaacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaattgaacaatccctggttacattacatgatatatacagacaggctccattaaacaa 500
Query: 301 ctataagtaatttttgatgaagaagctaagagggcaaaatagagaagggacagtaagttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctataagtaatttttgatgaagaagctaagagggcaaaatagagaagggacagtaagttt 560
Query: 361 caacaaatgatgataaacacattggataattactggaagaagaaatttattccatattta 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 561 caacaaatgatgataaacacattggataattactggaagaagaaatttattctatattta 620
Query: 421 gtctatatgaaaggaaaagttagtcataatagattaagtatcttagtaagaactgaactc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtctatatgaaaggaaaagttagtcataatagattaagtatcttagtaagaactgaactc 680
Query: 481 atgaaaaaagtagaaaaatgtatgaaaaatgtttttgaaagatatttttgaaaatatctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgaaaaaagtagaaaaatgtatgaaaaatgtttttgaaagatatttttgaaaatatctc 740
Query: 541 taaaatctagcaaacaatactaacagaaacaaatatagttgtggaaaagaaaacagtatc 600
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taaaatcaagcaaacaatactaacagaaacaaatatagttgtggaaaagaaaacagtatc 800
Query: 601 tccaaataaggaaaaaaaattaatgaatgaaaatcagatcatggaatggaagatcataca 660
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tccaaataaggaaaaaaa-ttaatgaatgaaaatcagatcatggaatggaagatcataca 859
Query: 661 aataaaag 668
||||||||
Sbjct: 860 aataaaag 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1067
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1057
Effective search space: 695506
Effective search space used: 695506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
