Query= MSMg01no194_n01.b1 MSMg01no194_n01.b1 CHROMAT_FILE:
MSMg01no194_n01.b1 PHD_FILE: MSMg01no194_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:48 2005
(661 letters)
>mm_chr12_97350952_97352012
Length = 1061
Score = 922 bits (477), Expect = 0.0
Identities = 489/493 (99%)
Strand = Plus / Minus
Query: 4 ggaattcatcttgaacaatgttttaaatctttaatttttgagataaccacaaaggttaaa 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ggaattcatcttgaaaaatgttttaaatctttaatttttgagataaccacaaaggttaaa 434
Query: 64 taagtagcatgataaaaatattaagtatagttcctgtcacatgagcttaaaatgttttat 123
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 433 taagtagcatgataaaaatattaagtatacttcctgtcacatgagcttaaaatgttttat 374
Query: 124 ttttattttgagtgaggtaagagatgaaatagacagttatgggtgactttgatgtacaat 183
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 373 ttttattttgagtgaggtaagagatggaatagacagttatgggtgactttgatgtacaat 314
Query: 184 tatattctttctgcattccaatagatcaccatgtataaagaatcctatgtgaggcattct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tatattctttctgcattccaatagatcaccatgtataaagaatcctatgtgaggcattct 254
Query: 244 tgatttagatatcatgaactcttttaactgcctcttctatggaattccctgagatatccc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tgatttagatatcatgaactcttttaactgcctcttctatggaattccctgagatatccc 194
Query: 304 atttttggaatcagtgttccaaagtctgtattgctcagtttaatgtgtggcagtgggtct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atttttggaatcagtgttccaaagtctgtattgctcagtttaatgtgtggcagtgggtct 134
Query: 364 tcattattctcccctctgtttcaagaggaagcctctaagaagatggctgagcaagacact 423
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tcattattatcccctctgtttcaagaggaagcctctaagaagatggctgagcaagacact 74
Query: 424 gatctattttcctaatcagagtccaaaaatactgtatgttcttgattaataaatttaaat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gatctattttcctaatcagagtccaaaaatactgtatgttcttgattaataaatttaaat 14
Query: 484 ttggaagttatgt 496
|||||||||||||
Sbjct: 13 ttggaagttatgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_n01.g1 MSMg01no194_n01.g1 CHROMAT_FILE:
MSMg01no194_n01.g1 PHD_FILE: MSMg01no194_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:48 2005
(631 letters)
>mm_chr12_97297336_97298363
Length = 1028
Score = 1181 bits (611), Expect = 0.0
Identities = 625/631 (99%), Gaps = 3/631 (0%)
Strand = Plus / Plus
Query: 1 atttccctggagttaatagcctcacagcttcgtcaaaccctttattgaaattaaaatgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttccctggagttaatagcctcacagcttcgtcaaaccctttattgaaattaaaatgtc 260
Query: 61 aggagaactctgagatgttcgtgctgaaagtttatttctattaagaactgctcaatgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggagaactctgagatgttcgtgctgaaagtttatttctattaagaactgctcaatgctc 320
Query: 121 gggtttcccacggattattgctgaaacttcatggttcataaaaatgaagggaggatttaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggtttcccacggattattgctgaaacttcatggttcataaaaatgaagggaggatttaa 380
Query: 181 gaattaaaataattactctctggctaaaatatgctttgcacctaaatccagctatatgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaattaaaataattactctctggctaaaatatgctttgcacctaaatccagctatatgca 440
Query: 241 gattaattattctatatttcccatatccatacaattttaaataaaaattgtgagaattgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gattaattattctatatttcccatatccatacaattttaaataaaaattgtgagaattgt 500
Query: 301 tatgaaatttaaatgttattttgagttaaatagtgacccctaaactgtacaagttttaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 tatgaaatttaaatgttattttgagttaaatagtgacccctaaactgta---gttttaaa 557
Query: 361 atacccttattgtttgcaaaaagaagcaaatgattttctttctctaacaattttatgttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 atacccttattgtttgcaaaaagaagcaaatgattttctttctctaacaattttatgttt 617
Query: 421 tcaatgtattatgaccactaatacctatgtaaaattttatctttataaagaaactataga 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tcaaggtattatgaccactaatacctatgtaaaattttatctttataaagaaactataga 677
Query: 481 gaaaaaattggaaaaacaatggtccaaagcataaaagcactttctgtaaatatggaggac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 678 gaaaaaattggaaaaacaatggtccaaagcataaaagcactttctgtaaatatgggggac 737
Query: 541 atgagtctgattcctaagactagcattatgatggctgaaagatggccagttctcccaagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 atgagtctgattcctaagactagcattatgatggctgaaagatggccagttctcccaagt 797
Query: 601 tgtcctctgactagcatgtacactataacac 631
|||||||||||||||||||||||||||||||
Sbjct: 798 tgtcctctgactagcatgtacactataacac 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1028
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1018
Effective search space: 632178
Effective search space used: 632178
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
