Query= MSMg01no195_b13.b1 MSMg01no195_b13.b1 CHROMAT_FILE:
MSMg01no195_b13.b1 PHD_FILE: MSMg01no195_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:12 2005
(684 letters)
>mm_chr12_75280943_75282029
Length = 1087
Score = 1251 bits (647), Expect = 0.0
Identities = 670/683 (98%), Gaps = 11/683 (1%)
Strand = Plus / Plus
Query: 8 gaattcagctttaccga----gaaacttgcagtacgctctttaccttcttcgtatcagag 63
||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcagctt----gaagttgaaacttgcagtacgctctttaccttcttcgtatcagag 263
Query: 64 cctgtttcaaaagtaaaatgagagcatccagctttcacagggactatcccactcctgggc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cctgtttcaaaagtaaaatgagagcatccagctttcacagggactatcccactcctgggc 323
Query: 124 tgttctgaacccacagaaagcagccatgactagagctatcattggaaagacggtgagctg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgttctgaacccacagaaagcagccatgactagagctatcattggaaagacggtgagctg 383
Query: 184 ttctctcctatgtgagtccgtaacaagcactgactcccattggagcctggctgaaccagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttctctcctatgtgagtccgtaacaagcactgactcccattggagcctggctgaaccagt 443
Query: 244 ctgcatgtgagccaggatttctta---ttctacttttctttgcaaagttggactcggtcc 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 444 ctgcatgtgagccaggatttcttattcttctacttttctttgcaaagttggactcggtcc 503
Query: 301 taaaaggcactatggcttatgcctcaggagctacactatattcacccacctgaagcgatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taaaaggcactatggcttatgcctcaggagctacactatattcacccacctgaagcgatc 563
Query: 361 tcagatcacactgggaactaagaaaaggggtgagctcaagtaattgattgatctccatgc 420
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 564 tcagatcacactgagaactaagaaagggggtgagctcaagtaattgattgatctccatgc 623
Query: 421 aaattagtttcatagggctcttatccagacatttagctttgttttctcttttttttctat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaattagtttcatagggctcttatccagacatttagctttgttttctcttttttttctat 683
Query: 481 ctccaattttatatctatctttacttctgggtttgctctatactcaagctgcatgatagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctccaattttatatctatctttacttctgggtttgctctatactcaagctgcatgatagt 743
Query: 541 gagatggctgtgaaatacctcccttttaatatgctattaggttacaatttgatggaggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gagatggctgtgaaatacctcccttttaatatgctattaggttacaatttgatggaggaa 803
Query: 601 aaatatcctcactttctggaaattaaaaatattaactctggaatctctaccacccagttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aaatatcctcactttctggaaattaaaaatattaactctggaatctctaccacccagttt 863
Query: 661 gatttatttggttggacttaatc 683
|||||||||||||||||||||||
Sbjct: 864 gatttatttggttggacttaatc 886
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1087
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1077
Effective search space: 725898
Effective search space used: 725898
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_b13.g1 MSMg01no195_b13.g1 CHROMAT_FILE:
MSMg01no195_b13.g1 PHD_FILE: MSMg01no195_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:12 2005
(525 letters)
>mm_chr12_75430723_75431647
Length = 925
Score = 1007 bits (521), Expect = 0.0
Identities = 524/525 (99%)
Strand = Plus / Minus
Query: 1 agtggcctgatgtgaactgtgcagagaatgtgacccctagaagccctttgaggattccta 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 725 agtggcctgatgtgaactgtgcagagaatatgacccctagaagccctttgaggattccta 666
Query: 61 ttctagatcacactactttttaaagagcttttccatggccttgctttttctcatgagcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ttctagatcacactactttttaaagagcttttccatggccttgctttttctcatgagcca 606
Query: 121 attcttgcctcctagagtaaacttgggcaggcaggggactcgaccctcaggaaagacggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 attcttgcctcctagagtaaacttgggcaggcaggggactcgaccctcaggaaagacggg 546
Query: 181 aggggtcctttgagatccatgcacaccccgggacaggggtggggggattgggaggagcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aggggtcctttgagatccatgcacaccccgggacaggggtggggggattgggaggagcct 486
Query: 241 gcaagatgagtgcaaatagttctcctggtagaaatactttcacggggaacagagggagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gcaagatgagtgcaaatagttctcctggtagaaatactttcacggggaacagagggagga 426
Query: 301 aagcgtgcccacaaccgtaagtgtccaacctggaggatgagtgtgctctaaaggtatttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aagcgtgcccacaaccgtaagtgtccaacctggaggatgagtgtgctctaaaggtatttg 366
Query: 361 atgggggcactgggaaacaagcaagaatttttctgttcttttaccagtgttggaggcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atgggggcactgggaaacaagcaagaatttttctgttcttttaccagtgttggaggcaaa 306
Query: 421 agataaattctgcactgaatggtatttataaattgccagtgaatcagctgggggtggctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agataaattctgcactgaatggtatttataaattgccagtgaatcagctgggggtggctt 246
Query: 481 gtggatgacagccaacactgatgcttggcgtcttgtccatggtgc 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gtggatgacagccaacactgatgcttggcgtcttgtccatggtgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
