Query= MSMg01no195_i19.b1 MSMg01no195_i19.b1 CHROMAT_FILE:
MSMg01no195_i19.b1 PHD_FILE: MSMg01no195_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:48 2005
(314 letters)
>mm_chr12_56302654_56303368
Length = 715
Score = 576 bits (298), Expect = e-169
Identities = 306/310 (98%), Gaps = 4/310 (1%)
Strand = Plus / Minus
Query: 6 aattccaagagtctctctatgatgtgactttgtattaacaaggacgcagtgtgtacacag 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aattccaagagtctctctatgatgtgactttgtattaacaaggacgcagtgtgtacacag 337
Query: 66 aaatcctttgtcatctgtgtaatgggaactcaggagaaaagaaaa-accatgggtattcc 124
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 336 aaatcctttgtcatctgtgtaatgggaactcaggagaaaagaaaataccatgggtattcc 277
Query: 125 tgggaggtttgcccttttctctactgccttcaatgttgaaatatttatttttaatcaaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tgggaggtttgcccttttctctactgccttcaatgttgaaatatttatttttaatcaaga 217
Query: 185 ctatgaaaactggggctggagggatgactcagaaattaagagcactccttcttcttcaaa 244
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 216 ctatgaaaactggggctggagggatgactcagaaattaagagcactc---cttcttcaaa 160
Query: 245 ggacccgagttcagttcccatcacccatgtcacatggctcaccactggtgaaactgcagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 ggacccgagttcagttcccatcacccatgtcacatggctcaccactggtgaaactgcagc 100
Query: 305 accaagcatt 314
||||||||||
Sbjct: 99 accaagcatt 90
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 715
Length adjustment: 9
Effective length of query: 305
Effective length of database: 706
Effective search space: 215330
Effective search space used: 215330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_i19.g1 MSMg01no195_i19.g1 CHROMAT_FILE:
MSMg01no195_i19.g1 PHD_FILE: MSMg01no195_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:48 2005
(285 letters)
>mm_chr12_56084172_56084856
Length = 685
Score = 536 bits (277), Expect = e-157
Identities = 283/285 (99%)
Strand = Plus / Plus
Query: 1 ttcatagaagcaacatgtgatagtaaatagcaagaagcacagaacatggaaggccttaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcatagaagcaacatgtgatagtaaatagcaagaagcacagaacatggaaggccttaga 260
Query: 61 aagatgaattcaagttctagtgccaacaagtgctaaaatatgtgactacaactgtaatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagatgaattcaagttctagtgccaacaagtgctaaaatatgtgactacaactgtaatcc 320
Query: 121 aggggcttaatcaagagcctgtaagccttcctcattcgtaaaaaggactcagttgacaag 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 aggggcttaatcaagagcctgtaagccttcctcattcgtgaaaaggactcagttgacaag 380
Query: 181 aacgacagacaaccaaacacaatgtactagaagctagtcaaatcttttcctcggggagct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 aacgacagacaaccaaacacaatgtactagaagctagtcaaatcttttcctcagggagct 440
Query: 241 tttcactgtaaacttgttctgggttgaagcaagatggattgccta 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttcactgtaaacttgttctgggttgaagcaagatggattgccta 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
