Query= MSMg01no198_a15.b1 MSMg01no198_a15.b1 CHROMAT_FILE:
MSMg01no198_a15.b1 PHD_FILE: MSMg01no198_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:08 2005
(212 letters)
>mm_chr12_30223459_30224070
Length = 612
Score = 404 bits (209), Expect = e-117
Identities = 209/209 (100%)
Strand = Plus / Plus
Query: 4 ggaattctggacttctggctttccagtagtcaataggaaaagtcatgatcatttgcattt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctggacttctggctttccagtagtcaataggaaaagtcatgatcatttgcattt 263
Query: 64 tctggatggacgtctcttttggccacatttcctgtaggctgccgtcaccagtgatagctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tctggatggacgtctcttttggccacatttcctgtaggctgccgtcaccagtgatagctc 323
Query: 124 ttctaatctctatgatgcagcgctcttaacctcaataggaactggttttgttttggctat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttctaatctctatgatgcagcgctcttaacctcaataggaactggttttgttttggctat 383
Query: 184 ttttttttccttttttttttttaaaggaa 212
|||||||||||||||||||||||||||||
Sbjct: 384 ttttttttccttttttttttttaaaggaa 412
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 612
Length adjustment: 9
Effective length of query: 203
Effective length of database: 603
Effective search space: 122409
Effective search space used: 122409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no198_a15.g1 MSMg01no198_a15.g1 CHROMAT_FILE:
MSMg01no198_a15.g1 PHD_FILE: MSMg01no198_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:08 2005
(284 letters)
>mm_chr12_30376867_30377551
Length = 685
Score = 503 bits (260), Expect = e-147
Identities = 278/288 (96%), Gaps = 9/288 (3%)
Strand = Plus / Minus
Query: 1 tttctttgacctcttatttgtttttagctttttctcttctct-----attaacaccaaaa 55
|||||||||||||||||||||||||||||||||||||||||| | || | ||||
Sbjct: 328 tttctttgacctcttatttgtttttagctttttctcttctctaaaaaa--aaaa--aaaa 273
Query: 56 aaaaagcccacagttgcctgaccataacctttcaagccatttagtgtctggttttgtttg 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaaaagcccacagttgcctgaccataacctttcaagccatttagtgtctggttttgtttg 213
Query: 116 ttgttttatgttacttcatggtaattggttttatctgagttaccaaagacctccattgtt 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ttgttttatgttacttcatggtaattggttttatctgagttaccaaagacctccattgtt 153
Query: 176 ccaaagcccagtggctgtgttctgttctcatctgctcacccctggcagagcctccctctt 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 ccaaagcccagtggctgtgttctgttctcatctgctcacccctggcagagcctccctctt 93
Query: 236 tcctactcgttttgactttccttttcccctttctagtcaatttctgac 283
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 tcctactcgttttgactttccttttcccctttctagtcaatttctgac 45
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 685
Length adjustment: 9
Effective length of query: 275
Effective length of database: 676
Effective search space: 185900
Effective search space used: 185900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
