Query= MSMg01no199_j07.b1 MSMg01no199_j07.b1 CHROMAT_FILE:
MSMg01no199_j07.b1 PHD_FILE: MSMg01no199_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:11 2005
(267 letters)
>mm_chr12_101318830_101319496
Length = 667
Score = 466 bits (241), Expect = e-136
Identities = 258/265 (97%), Gaps = 3/265 (1%)
Strand = Plus / Plus
Query: 3 ggaattcaaggccaattccctctcctacaaagcctgtcttcaggagtcagatcaccacta 62
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattcaaggccaatttcttctcctacaaagcctgtcttcaggagtcagatcaccacta 262
Query: 63 cagctctcattaaggtgcttttatcagagtacttcatcatagcaataagaag---aaaaa 119
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 263 cagctttcattaaggtgcttttatcagagtacttcatcatagcaataagaagaaaaaaaa 322
Query: 120 aaaaatcaaccaggagtggtggcatgcacctttgatcccagcactcaaaaggtagatgta 179
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 323 aaaaatcaaccaggagtggtggcatgcacctttgatcccagcactcaaaaggcagatgta 382
Query: 180 ggtggatctctgagtttgaggtcagcctgttttacaaagtgatttccagaatagccagga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggtggatctctgagtttgaggtcagcctgttttacaaagtgatttccagaatagccagga 442
Query: 240 ttacaaagagacaccctgacttgaa 264
|||||||||||||||||||||||||
Sbjct: 443 ttacaaagagacaccctgacttgaa 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 667
Length adjustment: 9
Effective length of query: 258
Effective length of database: 658
Effective search space: 169764
Effective search space used: 169764
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no199_j07.g1 MSMg01no199_j07.g1 CHROMAT_FILE:
MSMg01no199_j07.g1 PHD_FILE: MSMg01no199_j07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:11 2005
(242 letters)
>mm_chr12_101424507_101425148
Length = 642
Score = 453 bits (234), Expect = e-132
Identities = 240/242 (99%)
Strand = Plus / Minus
Query: 1 tggaaaacggaaaagaggtcagggttgttttagttcagtgggtggtgatatcttggtttt 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 442 tggaaaacggaaaagaggtcagggttgttttagttcagtgcgtggtgatatcttggtttt 383
Query: 61 atttgaggtgcgtaggtgcgcattcggtggatcctggatatccaaaggtgaattttggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atttgaggtgcgtaggtgcgcattcggtggatcctggatatccaaaggtgaattttggaa 323
Query: 121 cgccttggttgtgggtgttgccatggctacagggagaggggaggcagtgaattgttaaga 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 322 cgccttggttgtgggtgttgccatggctactgggagaggggaggcagtgaattgttaaga 263
Query: 181 ccaataaaagctgacagggcctggcctctctgttgcctgaattctttaaattgactgccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ccaataaaagctgacagggcctggcctctctgttgcctgaattctttaaattgactgccc 203
Query: 241 tg 242
||
Sbjct: 202 tg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
