TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACTTACAGAGCTTTTTCTGAAGCATAAATTTCTTAAATATAATTTT
AGCAAAGATTACCCCAGATAAACCTATTTTCAAAACATGCTAAGCTTTAA
CCTTTGCCCGATTATCTACAAAAGAACAGTAAGTATAACAACCTAAGACA
CAAGCTCTTCTTCGATTTATTTTCCTGGAGTTTTTGATATGAAATCACAG
TTTAAACTCTCAAAGGCTACTCAAGACAAGGAAGCTAAACCTAGACTTAC
CATCAAGCTGGGGTGGATACCTTTCCAAAGGCTGTGAGTGTCTTAACTCT
TACAGGAAGGGACATTTCTCAACACCGCTAAGAAACACATGTCAATTGCA
GAGTCAAGATCCTAGTCACTTTTCCCCAAAATTATTTACTGGTTGCATAA
ATCTCATATTATTTATGAAATGCTCTCTGATTATATCTGAAGGCATGACA
ATCTAGTCAGCACAGTGTATATTATACTTTATTGTTTCTGTGGTAAAACA
TCATGGCCCAGGCAGCTTAGAGAAGAAAGAATTTATTTTAGTTGATGACT
TAAGAGGAATAAGAGTCCATTATGTTGAAATTTCAGGGCAACAAGTGGCA
GACATAGCTTCAGGAGCAGAAGGCTGAGAGGATATATCATTCAACACAAG
CAGGGAGAGAACTGAAAG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGTGCCTCCAACATGCGACTACAC
CAACAGGGACTACTGAGAGTTCCCCCTGGCAGAGTCCGGGCTTGGCAGCC
TGGCAAGCAGACTCTGGAGATATCAGTTCCTTCCTGCTTTGAAGGAGGCA
GACAGCTTCCCTCCCCACTTCCCCCATCTCCTGCAAATATTGCCTACCTC
TGTGTTCTGGGCTGCTTTGCCTCAAGGGACTCAACTGTTTCTTTGGGTTT
TCAGGCTTCCGGAAGTACCATGCCAGAGATATTGTGTTGCATAAGCTTAG
GATTTCCGTTGTATCTCTGGGGAGCACGCACACCAAGCCTGAGACTGGAC
GTCATGCTAGGCCAGGAGAGGGCAGCCAGATCCAAGTGCCTAGGAAGAGA
ATTCAATATAAAGAAACAGACCCATTTCTCAAATGTAGGGAAATTGGCTG
CTTGAAAGTGATATGATTGGTAGGAATCTAAGAAGTAACCTCACCTCAGC
TTAGAGGAAGCATCAGGAAGAGCTTTCTAGAGAGGAAAAAGAAACAGAAA
TTAAACCCATTCTAGCCATAAGCATGGAGGACTCCACCAGCTGACTGAGC
ACAAAGAGAGGGACAAAGCCCAATTACTAATATAAAATACAACCATATAA
CACTATAATATAATAATATTTTTCCCACTG

Query= MSMg01no202_k09.b1 MSMg01no202_k09.b1 CHROMAT_FILE:
MSMg01no202_k09.b1 PHD_FILE: MSMg01no202_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:32 2005
         (483 letters)



>mm_chr12_28112580_28113462
          Length = 883

 Score =  934 bits (483), Expect = 0.0
 Identities = 483/483 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   attttcaaaacatgctaagctttaacctttgcccgattatctacaaaagaacagtaagta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttcaaaacatgctaagctttaacctttgcccgattatctacaaaagaacagtaagta 260

                                                                       
Query: 61  taacaacctaagacacaagctcttcttcgatttattttcctggagtttttgatatgaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taacaacctaagacacaagctcttcttcgatttattttcctggagtttttgatatgaaat 320

                                                                       
Query: 121 cacagtttaaactctcaaaggctactcaagacaaggaagctaaacctagacttaccatca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacagtttaaactctcaaaggctactcaagacaaggaagctaaacctagacttaccatca 380

                                                                       
Query: 181 agctggggtggatacctttccaaaggctgtgagtgtcttaactcttacaggaagggacat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctggggtggatacctttccaaaggctgtgagtgtcttaactcttacaggaagggacat 440

                                                                       
Query: 241 ttctcaacaccgctaagaaacacatgtcaattgcagagtcaagatcctagtcacttttcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctcaacaccgctaagaaacacatgtcaattgcagagtcaagatcctagtcacttttcc 500

                                                                       
Query: 301 ccaaaattatttactggttgcataaatctcatattatttatgaaatgctctctgattata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccaaaattatttactggttgcataaatctcatattatttatgaaatgctctctgattata 560

                                                                       
Query: 361 tctgaaggcatgacaatctagtcagcacagtgtatattatactttattgtttctgtggta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctgaaggcatgacaatctagtcagcacagtgtatattatactttattgtttctgtggta 620

                                                                       
Query: 421 aaacatcatggcccaggcagcttagagaagaaagaatttattttagttgatgacttaaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaacatcatggcccaggcagcttagagaagaaagaatttattttagttgatgacttaaga 680

              
Query: 481 gga 483
           |||
Sbjct: 681 gga 683


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space:   412929
Effective search space used:   412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no202_k09.g1 MSMg01no202_k09.g1 CHROMAT_FILE:
MSMg01no202_k09.g1 PHD_FILE: MSMg01no202_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:32 2005
         (285 letters)



>mm_chr12_28208495_28209179
          Length = 685

 Score =  520 bits (269), Expect = e-152
 Identities = 281/285 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtgcctccaacatgcgactacaccaacagggactactgagagttccccctggcagagtc 60
           ||||||||||||||||||||||||||||||||||||||||||| ||  | ||||||||||
Sbjct: 485 tgtgcctccaacatgcgactacaccaacagggactactgagagctcagcatggcagagtc 426

                                                                       
Query: 61  cgggcttggcagcctggcaagcagactctggagatatcagttccttcctgctttgaagga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cgggcttggcagcctggcaagcagactctggagatatcagttccttcctgctttgaagga 366

                                                                       
Query: 121 ggcagacagcttccctccccacttcccccatctcctgcaaatattgcctacctctgtgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggcagacagcttccctccccacttcccccatctcctgcaaatattgcctacctctgtgtt 306

                                                                       
Query: 181 ctgggctgctttgcctcaagggactcaactgtttctttgggttttcaggcttccggaagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ctgggctgctttgcctcaagggactcaactgtttctttgggttttcaggcttccggaagt 246

                                                        
Query: 241 accatgccagagatattgtgttgcataagcttaggatttccgttg 285
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 accatgccagagatattgtgttgcataagcttaggatttccgttg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space:   186576
Effective search space used:   186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)