CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCACTTTTATGACAACTGAAATGTGTGAATTATTTTTCAAATACTA
TGTTCCTGAAGGAATATGATGGCAACCGCTTTCTTCTGTTTGTTTGAATT
TCTAATGGAAAATCAAGGTCATGGCAGAGTATAATCTATGAACCAGGTTT
TTGGCTTTTGCTAGTATTAACTACAGAAGTCGAATAGACAAGCACATGTA
AAATAAAAACTCAATGTGGAAACATAAATAAATAATCCAGTCAACAGTTA
ATGAACACTTCATGATCTAGTGCATACATTTCAGAGAAAGGCTTGATCAC
ATGGTTACTATGACATGAAACTACAAGATCCTAATGATGAGGCTCAGCTC
ATGTAATGTGAAGGTAGAACCCATTCTTATCTATCGCTATATTACATGAC
ATAGATTGAATGTAGTCAATGTGCAAAACAAACTCTGTTCATCGAGGGCT
AACTAGGAGCCAACATGCATGCCTACACTTTGAGGCATAAACTGAATGAC
TCCTTGTACCACACTAAAGTGATTTTTATGCACAGATTCTCAGAAAAATA
AACAGGAACAACCACCACAGTTCTTGAGCTCTCCCCCAGCCCAGCCCACT
GCTACCCCTAAAACAACATGATATAAAGGGGAAAAAATTCCCAAATCAGG
TTGCTTATAATTATAAATAGAATGATCTGAGTCTAAAGGGGCTTAGAGGT
TATTTTA

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTGTGTCAGGATGGGATCAGCACTT
ATCTGTGTTATAAAGTGTAAATATTCACAAGGAATTTTGACAATGCGCAT
ATTTATGGAAATAACTATGGCCTTCTTTCCTTCTGTTTATTACTTCCCCA
ACCATAAGTCATTTTCATTTCTCTAAAACTGAAGCATTGTTCTAAAGCAT
TTATTGGTTGACAGCTGTGTTCATAAAGGACAGAGACTCCAGGGATACCT
GCTACTGCTGACACTGTCGTATTTACTAAGGCTCAAGACATGCAGTAAAT
GACAATTTTCCTTGTCTATATATTAACCCTCCACACTTTTGTAATAGTCA
CCTTTATTCCCCATTTTCGCCCCAACAATTTTAAAGCTTAAAGTCACAGA
ATGACTCTTGATCCAAGTGTGAAAGACATTGATTGCAAATAAAATGATTT
TACTTAACGGAAAAATGAAAGTTAGGTAAGCAGAAATCCAGTACTTATGA
AATCCAGCATGAGGCTACTGCTTTAAGTTTTCATGCTGGGTTTTGGAAGA
AAACACTCTGATACTAAACCTCAGCATTAATAATGTGGACAAGCCAGGTC
TTGAACTCTCATTTGCCTCACTGTATAATGGCAATATGGACATCTGACAT
AGGGTCGGAGGGATGGATTAGCATCTAACACGACTTGCTGCTCTCGCATA
GCACTGT

Query= MSMg01no203_c22.b1 MSMg01no203_c22.b1 CHROMAT_FILE:
MSMg01no203_c22.b1 PHD_FILE: MSMg01no203_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:24:15 2005
         (371 letters)



>mm_chr12_98285101_98285871
          Length = 771

 Score =  520 bits (269), Expect = e-152
 Identities = 281/285 (98%)
 Strand = Plus / Plus

                                                                       
Query: 87  tagtcaatgtgcaaaacaaactctgttcatcgagggctaactaggagccaacatgcatgc 146
           |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 287 tagttaatgtgcaaaacaaactctgttcatcgagggctaactaggaaccaacatgcatgc 346

                                                                       
Query: 147 ctacactttgaggcataaactgaatgactccttgtaccacactaaagtgatttttatgca 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ctacactttgaggcataaactgaatgactccttgtaccacactaaagtgatttttatgca 406

                                                                       
Query: 207 cagattctcagaaaaataaacaggaacaaccaccacagttcttgagctctcccccagccc 266
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 407 cagattctcagaaaaataaacaggaacaaccaccacaattcttgagctctcccccagccc 466

                                                                       
Query: 267 agcccactgctacccctaaaacaacatgatataaaggggaaaaaattcccaaatcaggtt 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 agcccactgctacccctaaaacaacatgatataaaggggaaaaaattcccaaatcaggtt 526

                                                        
Query: 327 gcttataattataaatagaatgatctgagtctaaaggggcttaga 371
           |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 527 gcttataattgtaaatagaatgatctgagtctaaaggggcttaga 571


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space:   275844
Effective search space used:   275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no203_c22.g1 MSMg01no203_c22.g1 CHROMAT_FILE:
MSMg01no203_c22.g1 PHD_FILE: MSMg01no203_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:24:15 2005
         (292 letters)



>mm_chr12_98447975_98448666
          Length = 692

 Score =  534 bits (276), Expect = e-156
 Identities = 288/292 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgtgtcaggatgggatcagcacttatctgtgttataaagtgtaaatattcacaaggaat 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 621 ctgtgtcaggatgggatcagcacttatctgtgttataaagtgtaaatatttagaaggaat 562

                                                                       
Query: 61  tttgacaatgcgcatatttatggaaataactatggccttctttccttctgtttattactt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 tttgacaatgcgcatatttatggaaataactatggccttctttccttctgtctattactt 502

                                                                       
Query: 121 ccccaaccataagtcattttcatttctctaaaactgaagcattgttctaaagcatttatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccccaaccataagtcattttcatttctctaaaactgaagcattgttctaaagcatttatt 442

                                                                       
Query: 181 ggttgacagctgtgttcataaaggacagagactccagggatacctgctactgctgacact 240
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 ggttgacagctgtgttcataaaggacagagactccagggatacctgctgctgctgacact 382

                                                               
Query: 241 gtcgtatttactaaggctcaagacatgcagtaaatgacaattttccttgtct 292
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcgtatttactaaggctcaagacatgcagtaaatgacaattttccttgtct 330


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space:   193289
Effective search space used:   193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)