TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTCAGTTATCTTCCCGGAACATCAAAGAATGTTCTAAGCATTAACC
ATTTCATCTGCAGCACATTGAAACACTCAATTTAATGATTTATAATTTAA
TAAATCAAGTTAGTGAGATGATGTTATTTTGCTACAATAATTTCCTACAG
TTAGACTTATTATTTTGGTGAGAAATAGGTATTATCTTTAAAATGTTATT
GACAAGTTAGTATCAAATAAAATGTTCTGATATTTAATTTAAAACAATTC
ATGGGAAGCAGGAGTGCAGACTTCCTGTTACAAGCTAAGCTTTAGAAGTA
GTGCTAGTCGGTTCACCTCTTACATTACTGAGGGCTGTCCTCAGAAACAG
AACTCAATGCAAGCAATCAGCTTGGAGAGTTCCAAATGATCTCTGCTTCT
AAACATATAGATACCATTGGTTCCTACATCCCTTCCTCCTTTTCTTCTGT
GGGGGCGGGCAGAGGGTTCTCCTGGCTCCACCTAGTGTTTGGCTGTGACT
CTCTACAACTACTTCCTTTAGTTGCTGCCTGGTTCCTTTAGTACTGTTTG
GTTCTATCGTGGGTCTATAAGCTATCCTGCCTCTGGTTCCTGACCATCCA
GACAGTGTCAGGTGTGGATTCCCTCTTATGGCATGCGCCTTAAGTTGAAT
CAGCCACTGGTTGGTCACTTCCACAAGTTCTGTGTCACCATTATCCTAGC
AAACCTTG

CCATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTCTCCAATACTTTTAACA
TGAAGGCATGTTGTATTTTGTCAGATGCTCTTTTCTGCATCTAAGGAGAT
GATTATGTGATGTTTTTGAGCTTGTTTACATAGAGAATTACGTCAATGGA
TTTTTGTATATTAAACCAACCTTGCATCTCTGCGATGATGCCTACTTGAT
CATAGTAAATGATGGTTTTAATGTGTTCTTGGATTCTGTTTGCAAGAATT
TTATTGAGTATTTTTGCATTGGTATGCATAAATGAGATTGGTCTGAAGTT
CTATTATGATTGGGACCTTGTGTGGTTTAGGTATCACAGTAATTGTGGCT
TCATAGAATGAGTTAGATACTGCCCCTTCTGTTTCTATTTTATGGAGTAG
TTTGAGGAAAATTGGTATCAGGTCTTCTTTGAAGGTCTGGTATAATTCTG
CACTAAATCCATATGGCCCTGGGCTTGTTTTGGTTGGGAGGTTTTTAATG
ATTTCCTCTATTTTCCTTGTGCAATATGCCCCTGCTTATTATCGTTTACT
TTCCTTTTACACACCCTTCTGTTTTCCTATTCTGTATTTATTTTTCTTCC
ATCTTTTCCCCTTCTTTCACCTCTCCCTTGACACATATTCCTATTCCAAG
TTTCTTCTTGCCCATCTTTATTTTCTATCTCTTTCAACACCGCTTACATA
TTTCTCTTTTTTTAATGTATCTGCAGTTTCCTATC

Query= MSMg01no203_d05.b1 MSMg01no203_d05.b1 CHROMAT_FILE:
MSMg01no203_d05.b1 PHD_FILE: MSMg01no203_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:24:17 2005
         (610 letters)



>mm_chr12_58804180_58805189
          Length = 1010

 Score = 1044 bits (540), Expect = 0.0
 Identities = 590/610 (96%), Gaps = 8/610 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttcagttatc--t--tcccggaacatcaaagaatgttctaagcattaaccattt 60
           ||||||||||||||||  |      ||||  ||||||||  |||||||||||||||||||
Sbjct: 772 gaattcttcagttatcaataa----ggaatgtcaaagaacattctaagcattaaccattt 717

                                                                       
Query: 61  catctgcagcacattgaaacactcaatttaatgatttataatttaataaatcaagttagt 120
           |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 716 catctatagcacattgaaacactcaatttaatgatttataatttaataaatcaagttatt 657

                                                                       
Query: 121 gagatgatgttattttgctacaataatttcctacagttagacttattattttggtgagaa 180
           ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 656 gaggtgatgttattttgctacaataatttcttacagttagacttattattttggtgagaa 597

                                                                       
Query: 181 ataggtattatctttaaaatgttattgacaagttagtatcaaataaaatgttctgatatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ataggtattatctttaaaatgttattgacaagttagtatcaaataaaatgttctgatatt 537

                                                                       
Query: 241 taatttaaaacaattcatgggaagcaggagtgcagacttcctgttacaagctaagcttta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 taatttaaaacaattcatgggaagcaggagtgcagacttcctgttacaagctaagcttta 477

                                                                       
Query: 301 gaagtagtgctagtcggttcacctcttacattactgagggctgtcctcagaaacagaact 360
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gaagtagtgttagtcggttcacctcttacattactgagggctgtcctcagaaacagaact 417

                                                                       
Query: 361 caatgcaagcaatcagcttggagagttccaaatgatctctgcttctaaacatatagatac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 416 caatgcaagcaatcagcttggagagttccaaatgatctctgcttctaaacatatagacac 357

                                                                       
Query: 421 cattggttcctacatcccttcctccttttcttctgtgggggcgggcagagggttctcctg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cattggttcctacatcccttcctccttttcttctgtgggggcgggcagagggttctcctg 297

                                                                       
Query: 481 gctccacctagtgtttggctgtgactctctacaactacttcctttagttgctgcctggtt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gctccacctagtgtttggctgtgactctctacaactacttcctttagttgctgcctggtt 237

                                                                       
Query: 541 cctttagtactgtttggttctatcgtgggtctataagctatcctgcctctggttcctgac 600
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 236 cctttagtactgtttggttctatcgtgggtctataagctgtcctgcctctggttcctgac 177

                     
Query: 601 catccagaca 610
           ||||||||||
Sbjct: 176 catccagaca 167


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space:   600000
Effective search space used:   600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)