Query= MSMg01no210_b12.b1 MSMg01no210_b12.b1 CHROMAT_FILE:
MSMg01no210_b12.b1 PHD_FILE: MSMg01no210_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:34:29 2005
(444 letters)
>mm_chr12_5568322_5569165
Length = 844
Score = 791 bits (409), Expect = 0.0
Identities = 433/441 (98%), Gaps = 2/441 (0%)
Strand = Plus / Minus
Query: 5 gaattcctaagggacccctcatagtcagccatggaactgaagagctgcctccagaagctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gaattcctaagggacccctcatagtcagccatggaactgaagagctgcctccagaagctt 585
Query: 65 ttgaaacaaggtcaaagaatccaccatctagatctatagtcttctcctctttcactatcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ttgaaacaaggtcaaagaatccaccatctagatctatagtcttctcctctttcactatcc 525
Query: 125 agatagccacagcaattacacaaggtccgcaaagctggactgcttcctgctgaaccaccc 184
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 524 agatagccacagcaattacacaaggtccccaaagctggactgcttcctgctgaaccaccc 465
Query: 185 catgtttgagctagtactaccactctcatctcacgatgcctgtccagtgtttcatcccca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 catgtttgagctagtactaccactctcatctcacgatgcctgtccagtgtttcatcccca 405
Query: 245 gataaaatgacagactgacaatctgctggatcatcctggaccactccctagaagatatgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gataaaatgacagactgacaatctgctggatcatcctggaccactccctagaagatatgt 345
Query: 305 cactttccctatgttgatatctcgcc-gcgaccagaaccttcaagaggtaatacagtgta 363
||||||||||| |||||||||| || | |||||||||||||||||||||||||||||||
Sbjct: 344 cactttccctaggttgatatct-gcaagtgaccagaaccttcaagaggtaatacagtgta 286
Query: 364 acccgctcccagcccctgctagaggttctggacacaagaggtgctgactggggcacacca 423
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 acccgcttcaagcccctgctagaggttctggacacaagaggtgctgactggggcacacca 226
Query: 424 agaccatttgtttgtacctct 444
|||||||||||||||||||||
Sbjct: 225 agaccatttgtttgtacctct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no210_b12.g1 MSMg01no210_b12.g1 CHROMAT_FILE:
MSMg01no210_b12.g1 PHD_FILE: MSMg01no210_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:34:29 2005
(287 letters)
>mm_chr12_5509723_5510409
Length = 687
Score = 551 bits (285), Expect = e-161
Identities = 285/285 (100%)
Strand = Plus / Plus
Query: 1 attatttttgaattcaacttgcactgctacagctaaggttaattattgatttgttttatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attatttttgaattcaacttgcactgctacagctaaggttaattattgatttgttttatt 260
Query: 61 ctgtgattaaagccattagctacgattagcacatgatgatgtttatgcgtgcttgaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtgattaaagccattagctacgattagcacatgatgatgtttatgcgtgcttgaatat 320
Query: 121 cagcggccttgctttttatagcagggcccaggctaaatgattgctctatgggactgaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagcggccttgctttttatagcagggcccaggctaaatgattgctctatgggactgaaat 380
Query: 181 ctacaatgggggttcacagagtcactggaagtaaccagtggtttgtccttgtgatagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctacaatgggggttcacagagtcactggaagtaaccagtggtttgtccttgtgatagaag 440
Query: 241 aataaacagaatctgattgcttccactaattattcttcttgagca 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aataaacagaatctgattgcttccactaattattcttcttgagca 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
