Query= MSMg01no210_m24.b1 MSMg01no210_m24.b1 CHROMAT_FILE:
MSMg01no210_m24.b1 PHD_FILE: MSMg01no210_m24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:30 2005
(620 letters)
>mm_chr12_36771665_36772684
Length = 1020
Score = 1067 bits (552), Expect = 0.0
Identities = 594/608 (97%), Gaps = 1/608 (0%)
Strand = Plus / Plus
Query: 13 tcctgctccctttcattcctcgctatcttcccttgctccacttgctctttgttctttctc 72
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 214 tcctgctccctttcattcctcgctatcttcccttgctccactcgctctttgttctttctc 273
Query: 73 tctctgtcgcatttgttgttattgttatttttttttctgagacagagatatctactttta 132
||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||| ||
Sbjct: 274 tctctgtagcatttgttgttattgtta-ttttttttctgagacaaagatatctacttata 332
Query: 133 tagcccaagctaacatcaaattgcatcctcctgcctcagtttccaggtgttgcaaaatac 192
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 333 tagcccaagctaacatcaaattgcatcctcctgcctcagcttccaggtgttgcaaaatac 392
Query: 193 agacatgggccacaaccatcagctgcttgggatgtcattctgagccgcagcaaagacaaa 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 agacatgggccacaaccatcagctgcttgggatgtcattctgagccgcagcaaagacaaa 452
Query: 253 ttcttgtgaatctttccagatcttccaagagtttgcctgccaaggctgggttaaaggtga 312
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttcttgtgagtctttccagatcttccaagagtttgcctgccaaggctgggttaaaggtga 512
Query: 313 aagaggttaatcggagaggaaaacctcagcgtgggactcaggaagaaacaggagtctggg 372
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 513 aagaggttaatcggagaggaaaacctcagagtgggactcaggaagaaataggagtctggg 572
Query: 373 aacgctagaccagcagccagcacacaagtgtacctgtgcaagggtggggagaggaacaaa 432
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 573 aatgctagaccagcagccagcacgcaagtgtacctgtgcaagggtggggagaggaacaaa 632
Query: 433 gagggaaggggcagaaaggtcacaacgagagaaagaaagtctgagtgtaacacagttcta 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gagggaaggggcagaaaggtcacaacgagagaaagaaagtctgagtgtaacacagttcta 692
Query: 493 agatctgccaaagcagctatgagttgaatacagttcagtgtctccccaagacgccctgga 552
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 693 agatctgccaaggcagctatgagttgaatacagtttagtgtctccccaagacgccctgga 752
Query: 553 ctgaaaattatttcccattgtgagttacttaagaagatgggaacataatctgacttcacg 612
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ctgaaaattatttcccattgtgagttacttaagaagatgggaacataatctgacttcacc 812
Query: 613 tttgggag 620
||||||||
Sbjct: 813 tttgggag 820
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no210_m24.g1 MSMg01no210_m24.g1 CHROMAT_FILE:
MSMg01no210_m24.g1 PHD_FILE: MSMg01no210_m24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:30 2005
(293 letters)
>mm_chr12_36850420_36851112
Length = 693
Score = 530 bits (274), Expect = e-155
Identities = 286/290 (98%)
Strand = Plus / Minus
Query: 1 atttcactgaatagaagttagctttcatggttaagtacccactttggaaagaataggttt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 490 atttcactgaatagaagttagttttcatggttaagtacccactttggaaagaataggttt 431
Query: 61 ataacaccagaatctagtgaaggctgggacatggagcaggtgtggtcagtgtatgatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 430 ataacaccagaatctagtgaaggctgggacatggagcaggtgtggtcggtgtatgatgtg 371
Query: 121 gagcagcgtatttggattatctggattggaacctgtcttgattgacacatgcgcatccaa 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gagcagcgtatttggattatccggattggaacctgtcttgattgacacatgcgcatccaa 311
Query: 181 tgggatttttttacatctactcctcagggttttccttgctcctctcttcatattttggcg 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 310 tgggatttttttacatctactcctcagggttttccttgctcctcacttcatattttggcg 251
Query: 241 ttgtccctccactgcgtcctaactgtaataacttgtcttcacagcccctg 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttgtccctccactgcgtcctaactgtaataacttgtcttcacagcccctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
